Paracoccus denitrificans R-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Paracoccus denitrificans R-1 RM systems
Ref: Chunchen,H. and Yiguo,H. unpublished
REBASE ref # 33647
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,466,823 bp | CP087986 |
| chromosome 2: | 1,720,549 bp | CP087987 |
| plasmid palasmid1: | 694,054 bp | CP087988 |
REBASE acronym: PdeR1
Org_num: 54801
All begin LO749_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1705 | 83 aa hypothetical protein | |||
| 1710 | M | M1.Ppa2944ORF3635P (87% identity) | M.PdeR1ORF1710P | |
| 1715 | tyrosine-type recombinase/integrase | |||
| 2245 | GSCFA domain-containing protein | |||
| 2250 | M | M.PdeOD1ORFBP (100% identity) | GANTC | M.PdeR1ORF2250P |
| 2255 | ribonuclease HII | |||
| 6335 | SOS response-associated peptidase family | |||
| 6340 | M | M.PspSMMA5ORF10485P (88% identity) | M.PdeR1ORF6340P | |
| 6345 | helix-turn-helix transcriptional regulator | |||
| 6420 | 85 aa hypothetical protein | |||
| 6425 | M | M.Rsp17025ORF2112P (66% identity) | M.PdeR1ORF6425P | |
| 6430 | 139 aa hypothetical protein | |||
| 9290 | 60 aa hypothetical protein | |||
| 9295 | M | M.Ppa2944ORF18650P (62% identity) | M.PdeR1ORF9295P | |
| 9300 | 60 aa hypothetical protein | |||
| chromosome 2 | ||||
| 13505 | DUF2285 domain-containing protein | |||
| 13510 | M | M.Pve17099ORF1730P (84% identity) | M.PdeR1ORF13510P | |
| 13515 | 96 aa hypothetical protein | |||
| 14185 | GNAT family N-acetyltransferase | |||
| 14190 | RM | SmaEY1ORF27055P (90% identity) | PdeR1ORF14200P | |
| 14195 | M | M2.Afa1ORF14080P (83% identity) | M2.PdeR1ORF14200P | |
| 14200 | M | M1.Pac278ORF812P (54% identity) | M1.PdeR1ORF14200P | |
| 14205 | type II toxin-antitoxin system Phd/YefM family | |||
| 14935 | 138 aa hypothetical protein | |||
| 14940 | M | M.PmuRSP02ORF8955P (54% identity) | M.PdeR1ORF14940P | |
| 14945 | 96 aa hypothetical protein | |||
| 15025 | IS630 family transposase | |||
| 15030 | M | M.Psp29334ORF4330P (64% identity) | M.PdeR1ORF15030P | |
| 15035 | 314 aa hypothetical protein | |||
| 15040 | V | V.Bsp436ORF8585P (34% identity) | V.PdeR1ORF15030P | |
| 15045 | ParB/RepB/Spo0J family partition protein | |||
| plasmid palasmid1 | ||||
| 21425 | 96 aa hypothetical protein | |||
| 21430 | M | M.Ppa10489ORF18610P (79% identity) | M.PdeR1ORF21430P | |
| 21435 | 170 aa hypothetical protein | |||
| 21745 | 138 aa hypothetical protein | |||
| 21750 | M | M.PspD09ORF15625P (96% identity) | M.PdeR1ORF21750P | |
| 21755 | 96 aa hypothetical protein | |||