Escherichia coli O145:H28 12E115 |
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Putative Escherichia coli O145:H28 12E115 RM systems
Ref: Nakamura,K. et al. unpublished
REBASE ref # 33395
| Sequence length: | GenBank #: | |
| Chromosome: | 5,520,894 bp | AP024921 |
| plasmid pO145_12E115_1: | 91,031 bp | AP024922 |
| plasmid pO145_12E115_2: | 67,947 bp | AP024923 |
REBASE acronym: EcoE115
Org_num: 53842
All begin EC12E115_, EC12E115_p1-, EC12E115_p2-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2569 | metal-dependent hydrolase | |||
| 2570 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | EcoE115ORF2574P |
| 2571 | 620 aa hypothetical protein | |||
| 2572 | 227 aa hypothetical protein | |||
| 2573 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.EcoE115ORF2574P |
| ??? | M | M.Eco3084ORFFP (100% identity) | GATGNNNNNNTAC | M.EcoE115ORF2574P |
| 2576 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1521 | 65 aa hypothetical protein | |||
| 1522 | M | M.Eco9873ORF12805P (100% identity) | M.EcoE115ORF1522P | |
| 1523 | Shiga toxin 2 subunit A | |||
| 2629 | amino acid exporter for phenylalanine | |||
| 2630 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoE115DcmP |
| 2631 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.EcoE115DcmP |
| 2632 | HD superfamily phosphohydrolase | |||
| 4006 | global DNA-binding transcriptional dual | |||
| 4007 | M | M.Eco10942ORF3846P (100% identity) | ATGCAT | M.EcoE115ORF4007P |
| 4008 | 59 aa hypothetical protein | |||
| 4106 | D-ribulose-5-phosphate 3-epimerase | |||
| 4107 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE115DamP |
| 4108 | cell division protein DamX | |||
| 4715 | 77 aa hypothetical protein | |||
| 4716 | M | M.SflFF35ORF20P (100% identity) | GGCC | M.EcoE115ORF4716P |
| 4717 | 330 aa hypothetical protein | |||
| 5146 | 678 aa hypothetical protein | |||
| 5147 | R | Eco9873ORF26715P (100% identity) | EcoE115ORF5147P | |
| 5148 | N-acetylneuraminate epimerase | |||
| 5154 | ATP-dependent helicase | |||
| ??? | RM | Eco9873ORF26755P (100% identity) | EcoE115ORF5155P | |
| plasmid pO145_12E115_1 | ||||
| 53 | 308 aa hypothetical protein | |||
| 54 | M | M.EcopO26ORF185P (100% identity) | SAY | M.EcoE115ORF54P |
| 55 | 73 aa hypothetical protein | |||
| plasmid pO145_12E115_2 | ||||
| 14 | 308 aa hypothetical protein | |||
| 15 | M | M.Sen1357ORF24335P (100% identity) | M.EcoE115ORF15P | |
| 16 | 73 aa hypothetical protein | |||