Helicobacter cinaedi T36 |
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Putative Helicobacter cinaedi T36 RM systems
Ref: Gotoh,Y. et al. unpublished
REBASE ref # 26658
Complete sequence: 2,085,709 bp
GenBank #: AP025196
REBASE acronym: HciT36
Org_num: 54081
All begin T36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 40 | 50 aa hypothetical protein | |||
| 41 | M | M.Cje195ORF166P (67% identity) | M.HciT36ORF41P | |
| 42 | S | S.Cmu21559ORF1143P (46% identity) | S.HciT36ORF41P | |
| 43 | 532 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 82 | RNA polymerase sigma-54 factor | |||
| 83 | R | Hci12221IP (98% identity) | HciT36ORF84P | |
| 84 | M | M.Hci12221I (93% identity) | M.HciT36ORF84P | |
| 85 | 30S ribosomal protein S2 | |||
| 673 | nitrogen fixation protein NifU | |||
| 674 | R | Hci798ORFVP (96% identity) | HciT36ORF675P | |
| 675 | M | M.HciP01DORFZP (90% identity) | M.HciT36ORF675P | |
| 676 | cysteine desulfurase IscS | |||
| 883 | 584 aa hypothetical protein | |||
| 884 | M | M.HbiMUI (99% identity) | GGNCC | M.HciT36ORF884P |
| 885 | R | Hfe13101IIIP (95% identity) | GGNCC | HciT36ORF884P |
| 886 | 136 aa hypothetical protein | |||
| 892 | mcrBC 5-methylcytosine restriction system | |||
| 893 | M | M.Hci12221II (91% identity) | M.HciT36ORF893P | |
| 894 | RDD family protein | |||
| 1019 | 105 aa hypothetical protein | |||
| 1020 | RM | Hci629ORFCP (89% identity) | HciT36ORF1020P | |
| 1021 | arginyl-tRNA--protein transferase | |||
| 1722 | 101 aa hypothetical protein | |||
| 1723 | RM | Hci12219ORF276P (47% identity) | HciT36ORF1723P | |
| 1724 | 236 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | NADP-dependent alcohol dehydrogenase | |||
| 11 | M | M.Cup736ORF1980P (60% identity) | M.HciT36ORF11P | |
| 12 | R | HbiMUORF3930P (99% identity) | HciT36ORF11P | |
| 13 | UPF0721 transmembrane protein | |||
| 1396 | S-adenosylmethionine synthase | |||
| 1397 | R | Hca12410ORF1547P (88% identity) | HciT36ORF1398P | |
| 1398 | M | M.Hca12410ORF1547P (71% identity) | M.HciT36ORF1398P | |
| 1399 | 143 aa hypothetical protein | |||
| 1984 | 322 aa hypothetical protein | |||
| 1985 | M | M.HbiMUORF9020P (32% identity) | M.HciT36ORF1985AP | |
| 1986 | M | M.HbiMUORF9020P (38% identity) | M.HciT36ORF1985BP | |
| 1987 | R | HbiMUORF9020P (96% identity) | HciT36ORF1985P | |
| 1988 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 890 | amino acid ABC transporter permease | |||
| 891 | R | HbiAAQJHMcrBP (54% identity) | HciT36McrBP | |
| 892 | R | Hci12219McrCP (76% identity) | HciT36McrCP | |
| 893 | 215 aa hypothetical protein | |||