Aeromonas caviae NUITM-VA2 |
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Putative Aeromonas caviae NUITM-VA2 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 32924
Complete sequence: 5,035,951 bp
GenBank #: AP025280
REBASE acronym: AcaVA2
Org_num: 52841
All begin NUITMVA2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 510 | 203 aa hypothetical protein | |||
| ??? | S | S2.Aca5ORF300P (97% identity) | S2.AcaVA2ORF520P | |
| 520 | M | M.Aca5ORF300P (100% identity) | M.AcaVA2ORF520P | |
| 530 | S | S1.Aca5ORF300P (100% identity) | S1.AcaVA2ORF520P | |
| 540 | ATPase AAA | |||
| 550 | R | Aca5ORF300P (100% identity) | AcaVA2ORF520P | |
| 560 | metal-dependent hydrolase | |||
| 4590 | transposase | |||
| 4600 | M | M.AcaR256II (100% identity) | GGACNNNNCTT | M.AcaVA2ORF4600P |
| ??? | S | S.AcaR256II (100% identity) | GGACNNNNCTT | S.AcaVA2ORF4600P |
| 4620 | 683 aa hypothetical protein | |||
| 4630 | restriction endonuclease | |||
| 4640 | R | AcaR256IIP (100% identity) | GGACNNNNCTT | AcaVA2ORF4600P |
| 4650 | 108 aa hypothetical protein | |||
| 10690 | 133 aa hypothetical protein | |||
| 10700 | S | S.Aca27183ORF17135P (91% identity) | S.AcaVA2ORF10710P | |
| 10710 | M | M.Aca27183ORF17135P (99% identity) | M.AcaVA2ORF10710P | |
| 10720 | R | Aca27183ORF17135P (100% identity) | AcaVA2ORF10710P | |
| 10730 | 67 aa hypothetical protein | |||
| 12930 | 222 aa hypothetical protein | |||
| 12940 | R | Ahy1R2IP (99% identity) | AcaVA2ORF12970P | |
| 12950 | 183 aa hypothetical protein | |||
| 12960 | S | S.Rpl5ORF6005P (72% identity) | S.AcaVA2ORF12970P | |
| 12970 | M | M.Ave18197ORFFP (98% identity) | M.AcaVA2ORF12970P | |
| 12980 | antitoxin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8920 | 215 aa hypothetical protein | |||
| 8930 | M | M.Ave18977ORFBP (85% identity) | M.AcaVA2ORF8930P | |
| 8940 | 113 aa hypothetical protein | |||
| 19640 | 583 aa hypothetical protein | |||
| 19650 | RM | Aca643ORF18860AP (45% identity) | AcaVA2ORF19650P | |
| 19660 | 236 aa hypothetical protein | |||
| 27310 | 114 aa hypothetical protein | |||
| 27320 | M | M2.Aca1520ORF8090P (98% identity) | M.AcaVA2ORF27320P | |
| 27330 | 138 aa hypothetical protein | |||
| 32730 | ribulose-phosphate 3-epimerase | |||
| 32740 | M | M.AspWP2DamP (100% identity) | GATC | M.AcaVA2DamP |
| 32750 | cell division protein DamX | |||
| 34980 | DNA topoisomerase III | |||
| 34990 | M | M.Paes32ORF3801P (100% identity) | M.AcaVA2ORF34990P | |
| 35000 | 252 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 37110 | chemotaxis protein | |||
| 37120 | M | M.Aca54ORF14895P (100% identity) | M.AcaVA2ORF37120P | |
| 37130 | R | Aca54ORF14895P (100% identity) | AcaVA2ORF37120P | |
| 37140 | DNA repair protein RadC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4610 | type I restriction-modification system subunit | |||
| 4620 | R | Asp1418McrBP (100% identity) | AcaVA2McrBP | |
| 4630 | R | Asp1418McrCP (100% identity) | AcaVA2McrCP | |
| 4640 | DEAD/DEAH box helicase | |||
| 27570 | IS4 family transposase ISH8E | |||
| 27580 | R | AhyAYN7McrBP (86% identity) | AcaVA2McrB2P | |
| ??? | R | AdhHTASMcrCP (96% identity) | AcaVA2McrC2P | |
| 27600 | integrase | |||