Deinococcus radiophilus ATCC 27603 |
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Putative Deinococcus radiophilus ATCC 27603 RM systems
Ref: Lim,S.W. and Cocioba,S. unpublished
REBASE ref # 33310
| Sequence length: | GenBank #: | |
| Chromosome: | 2,152,572 bp | CP086380 |
| plasmid pRadio2: | 224,843 bp | CP086382 |
| plasmid pRadio3: | 94,446 bp | CP086384 |
| plasmid pRadio4: | 25,952 bp | CP086383 |
| plasmid pRadio6: | 10,303 bp | CP086386 |
REBASE acronym: Dra27603
Org_num: 53406
All begin LMT64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8865 | AAA family ATPase | |||
| 8870 | M | M.DgoI0ORF2775P (77% identity) | M.Dra27603ORF8870P | |
| 8875 | DUF6508 domain-containing protein | |||
| 8880 | DUF262 domain-containing protein | |||
| 8885 | S | S.Ahy1850ORF1812P (16% identity) | S1.Dra27603ORF8870P | |
| 8890 | winged helix-turn-helix domain-containing | |||
| 8895 | S | S.BceDLOUORFBP (34% identity) | S2.Dra27603ORF8870P | |
| 8900 | IS4 family transposase | |||
| 8905 | 159 aa hypothetical protein | |||
| 8910 | 195 aa hypothetical protein | |||
| 8915 | 257 aa hypothetical protein | |||
| 8920 | 142 aa hypothetical protein | |||
| 8925 | R | DgoI0ORF2775P (75% identity) | Dra27603ORF8870P | |
| 8935 | Glu/Leu/Phe/Val dehydrogenase | |||
| plasmid pRadio3 | ||||
| 13955 | M48 family metallopeptidase | |||
| 13425 | R | AspB1ORF2526P (63% identity) | Dra27603ORF13455P | |
| 13430 | DNA binding domain-containing protein | |||
| 13435 | HigA family addiction module antitoxin | |||
| 13440 | type II toxin-antitoxin system RelE/ParE family | |||
| 13445 | DUF262 domain-containing HNH endonuclease family | |||
| 13450 | S | S.TxiM5ORF20763P (44% identity) | S.Dra27603ORF13455P | |
| 13455 | M | M.SraA1ORF1143P (66% identity) | M.Dra27603ORF13455P | |
| 13460 | DUF3883 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1050 | type II toxin-antitoxin system PemK/MazF family | |||
| 1055 | R | DraI (100% identity) | TTTAAA | Dra27603ORF1060P |
| 1060 | M | M.DraI (100% identity) | TTTAAA | M.Dra27603ORF1060P |
| 1065 | carbamoyl-phosphate synthase large subunit | |||
| 10080 | aminomethyl-transferring glycine dehydrogenase | |||
| 10085 | C | C.DraIIIP (100% identity) | C.Dra27603ORF10095P | |
| ??? | R | DraIII (100% identity) | CACNNNGTG | Dra27603ORF10095P |
| 10095 | M | M.DraIII (99% identity) | CACNNNGTG | M.Dra27603ORF10095P |
| 10100 | 167 aa hypothetical protein | |||
| plasmid pRadio2 | ||||
| 12600 | IS982 family transposase | |||
| 12605 | RM | DraRORFB137P (72% identity) | Dra27603ORF12605P | |
| 12610 | DEAD/DEAH box helicase | |||
| plasmid pRadio4 | ||||
| 13345 | replication initiation protein | |||
| 13350 | RM | DspRLORF10975P (78% identity) | Dra27603ORF13350P | |
| 13355 | toll/interleukin-1 receptor domain-containing | |||
| plasmid pRadio6 | ||||
| 14145 | 108 aa hypothetical protein | |||
| 14100 | R | HgeGC42ORF13350P (47% identity) | Dra27603ORF14095P | |
| 14095 | M | M.RspDEMB1ORF30955P (53% identity) | M.Dra27603ORF14095P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7150 | LexA family transcriptional regulator | |||
| 7155 | M | M.Pde6672ORF1454P (17% identity) | M.Dra27603ORF7155AP | |
| 7160 | IS4 family transposase | |||
| 7165 | M | M.DspAJ005ORF3045P (43% identity) | M.Dra27603ORF7155BP | |
| 7170 | IS4 family transposase | |||
| 7175 | R | TspA52ORF10470P (26% identity) | Dra27603ORF7155AP | |
| 7180 | transposase | |||
| 7185 | R | Psy1466ORFCP (11% identity) | Dra27603ORF7155BP | |
| 7190 | IS4 family transposase | |||