Escherichia fergusonii EF20JDJ4045 |
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Putative Escherichia fergusonii EF20JDJ4045 RM systems
Ref: Lin,J. and Tang,B. unpublished
REBASE ref # 33422
| Sequence length: | GenBank #: | |
| Chromosome: | 4,559,849 bp | CP086604 |
| plasmid pEF45-1: | 236,839 bp | CP086605 |
| plasmid pEF45-2: | 119,765 bp | CP086606 |
| plasmid pEF45-3: | 101,785 bp | CP086607 |
REBASE acronym: Efe4045
Org_num: 53973
All begin LNN29_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7435 | DUF1317 domain-containing protein | |||
| 7440 | M | M.EfeC13ORF14690P (100% identity) | M.Efe4045ORF7440P | |
| 7445 | cell division protein ZapA | |||
| 12250 | anti-phage defense ZorAB system protein ZorA | |||
| 12255 | M | M.Efe9LTDndBP (100% identity) | M.Efe4045DndBP | |
| 12260 | DNA phosphorothioation system sulfurtransferase | |||
| 12255 | DNA sulfur modification protein DndB | |||
| 12260 | M | M.Efe9LTDndCP (99% identity) | M.Efe4045DndCP | |
| 12265 | DNA sulfur modification protein DndD | |||
| 12260 | DNA phosphorothioation system sulfurtransferase | |||
| 12265 | M | M.Efe9LTDndDP (100% identity) | M.Efe4045DndDP | |
| 12270 | DNA sulfur modification protein DndE | |||
| 12265 | DNA sulfur modification protein DndD | |||
| 12270 | M | M.Efe9LTDndEP (100% identity) | M.Efe4045DndEP | |
| 12275 | DGQHR domain-containing protein | |||
| 12280 | 174 aa hypothetical protein | |||
| 12285 | R | Efe44C01DptHP (100% identity) | Efe4045DptHP | |
| 12290 | DNA phosphorothioation-dependent restriction | |||
| 12285 | DNA phosphorothioation-dependent restriction | |||
| 12290 | R | Efe9LTDptGP (100% identity) | Efe4045DptGP | |
| 12295 | DNA phosphorothioation-dependent restriction | |||
| 12290 | DNA phosphorothioation-dependent restriction | |||
| 12295 | R | Efe9LTDptFP (100% identity) | Efe4045DptFP | |
| 12300 | integrase arm-type DNA-binding domain-containing | |||
| 12945 | DNA-binding transcriptional regulator Fis | |||
| 12950 | M | M.EfeC18ORF19205P (100% identity) | ATGCAT | M.Efe4045ORF12950P |
| 12955 | DUF2556 family protein | |||
| 13470 | ribulose-phosphate 3-epimerase | |||
| 13475 | M | M.EfeTDamP (100% identity) | GATC | M.Efe4045DamP |
| 13480 | cell division protein DamX | |||
| 16810 | bifunctional isocitrate dehydrogenase | |||
| 16815 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe4045ORF16815P |
| 16820 | glyoxylate bypass operon transcriptional | |||
| 21210 | IS3 family transposase | |||
| 21215 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Efe4045ORF21215P |
| 21220 | R | Sso8033ORF3755P (100% identity) | CCWGG | Efe4045ORF21215P |
| 21225 | 121 aa hypothetical protein | |||
| plasmid pEF45-1 | ||||
| 22720 | 55 aa hypothetical protein | |||
| 22725 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Efe4045ORF22725P |
| 22730 | thermonuclease family protein | |||
| 23180 | 48 aa hypothetical protein | |||
| 23185 | M | M.YpsF1ORFBP (100% identity) | M.Efe4045ORF23185P | |
| 23190 | 202 aa hypothetical protein | |||
| 23300 | DNA-binding protein | |||
| 23305 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Efe4045ORF23305P |
| 23310 | 284 aa hypothetical protein | |||
| plasmid pEF45-2 | ||||
| 23465 | recombination-associated protein RdgC | |||
| 23470 | M | M.Eco17C14ORF20690P (99% identity) | M.Efe4045ORF23470P | |
| 23480 | SPFH/Band 7/PHB domain protein | |||
| plasmid pEF45-3 | ||||
| 24285 | 103 aa hypothetical protein | |||
| 24290 | M | M.SspPIBORF23080P (100% identity) | M.Efe4045ORF24290P | |
| 24295 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12220 | IS66 family transposase | |||
| 12225 | R | Efe44C01MrrP (100% identity) | Efe4045MrrP | |
| 12230 | IS3 family transposase | |||