Escherichia coli 1585m1 |
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Putative Escherichia coli 1585m1 RM systems
Ref: Wyrsch,E.R. et al. unpublished
REBASE ref # 33266
| Sequence length: | GenBank #: | |
| Chromosome: | 4,809,054 bp | CP086391 |
| plasmid p1585m1_A: | 142,329 bp | CP086389 |
| plasmid p1585m1_B: | 113,047 bp | CP086388 |
| plasmid p1585m1_C: | 107,575 bp | CP086387 |
REBASE acronym: Eco1585m1
Org_num: 53261
All begin LM401_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20640 | M48 family metallopeptidase | |||
| 20645 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco1585m1ORF20645P | |
| 20650 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco1585m1ORF20645P | |
| 20655 | 61 aa hypothetical protein | |||
| 23680 | type II toxin-antitoxin system RelB/DinJ family | |||
| 23685 | M | M.SenS0935ORF770P (100% identity) | ACYNNNNNNGTTC | M.Eco1585m1ORF23685P |
| 23690 | S | S.SenS0935ORF770P (100% identity) | ACYNNNNNNGTTC | S.Eco1585m1ORF23685P |
| 23695 | R | SenS0935ORF770P (100% identity) | ACYNNNNNNGTTC | Eco1585m1ORF23685P |
| 23700 | 184 aa hypothetical protein | |||
| plasmid p1585m1_B | ||||
| 665 | SPFH/Band 7/PHB domain protein | |||
| 670 | M | M.Sen557928ORF18960P (44% identity) | M.Eco1585m1ORF670P | |
| 675 | IS3-like element ISEc52 family transposase | |||
| plasmid p1585m1_C | ||||
| 420 | type II toxin-antitoxin system Phd/YefM family | |||
| 425 | M | M.EfeE4C07ORF22010P (100% identity) | GAANNNNNNNNTTC | M.Eco1585m1ORF425P |
| 430 | S | S.EfeE4C07ORF22010P (100% identity) | GAANNNNNNNNTTC | S.Eco1585m1ORF425P |
| 435 | R | EfeE4C07ORF22010P (100% identity) | GAANNNNNNNNTTC | Eco1585m1ORF425P |
| 440 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1585m1DamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2895 | DUF2556 family protein | |||
| 2900 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1585m1ORF2900P |
| 2905 | DNA-binding transcriptional regulator Fis | |||
| 9455 | HD domain-containing protein | |||
| 9460 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco1585m1DcmP |
| 9465 | V | V.SflN107DcmP (100% identity) | V.Eco1585m1DcmP | |
| 9470 | drug/metabolite exporter YedA | |||
| 11525 | DUF977 family protein | |||
| 11530 | M | M.EcoW046ORF2910P (100% identity) | M.Eco1585m1ORF11530P | |
| 11535 | 139 aa hypothetical protein | |||
| plasmid p1585m1_A | ||||
| 1285 | DNA-binding protein | |||
| 1290 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco1585m1ORF1290P |
| 1295 | 284 aa hypothetical protein | |||
| 1800 | 55 aa hypothetical protein | |||
| 1805 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco1585m1ORF1805P |
| 1810 | thermonuclease family protein | |||