Escherichia coli elppa2 |
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Putative Escherichia coli elppa2 RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
| Sequence length: | GenBank #: | |
| Chromosome: | 4,956,310 bp | CP083530 |
| plasmid unnamed1: | 155,994 bp | CP083531 |
| plasmid unnamed2: | 268,672 bp | CP083532 |
REBASE acronym: Ecoppa2
Org_num: 53950
All begin K9U05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22430 | M48 family metallopeptidase | |||
| 22435 | R | EcoZ30ORF9490P (100% identity) | GATGNNNNNNTAC | Ecoppa2ORF22455P |
| 22440 | cold shock domain-containing protein | |||
| 22445 | YecA family protein | |||
| 22450 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Ecoppa2ORF22455P |
| 22455 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Ecoppa2ORF22455P |
| 22460 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6230 | DNA-binding transcriptional regulator Fis | |||
| 6235 | M | M.EcoZ30ORF2325P (100% identity) | ATGCAT | M.Ecoppa2ORF6235P |
| 6240 | DUF2556 family protein | |||
| 6760 | ribulose-phosphate 3-epimerase | |||
| 6765 | M | M.SflC32DamP (99% identity) | GATC | M.Ecoppa2DamP |
| 6770 | cell division protein DamX | |||
| 9875 | 68 aa hypothetical protein | |||
| 9880 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.Ecoppa2ORF9880P |
| 9885 | 345 aa hypothetical protein | |||
| 12075 | DEAD/DEAH box helicase | |||
| 12080 | RM | EcoZ30ORF19095P (99% identity) | Ecoppa2ORF12080P | |
| 22700 | drug/metabolite exporter YedA | |||
| 22705 | V | V.EcoZ30DcmP (100% identity) | V.Ecoppa2DcmP | |
| 22710 | M | M.EcoZ30DcmP (100% identity) | CCWGG | M.Ecoppa2DcmP |
| 22715 | phosphohydrolase | |||
| plasmid unnamed1 | ||||
| 24205 | 73 aa hypothetical protein | |||
| 24210 | M | M.SflN92ORF24820P (99% identity) | M.Ecoppa2ORF24210P | |
| 24215 | 101 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24385 | 48 aa hypothetical protein | |||
| 24390 | M | M.Eco2474ORF24060P (100% identity) | M.Ecoppa2ORF24390P | |
| 24395 | 202 aa hypothetical protein | |||
| 24565 | DNA-binding protein | |||
| 24570 | M | M.SenBL10ORFDP (99% identity) | M.Ecoppa2ORF24570P | |
| 24575 | 284 aa hypothetical protein | |||
| 25295 | 55 aa hypothetical protein | |||
| 25300 | M | M.YpsF1ORFCP (99% identity) | M.Ecoppa2ORF25300P | |
| 25305 | thermonuclease family protein | |||