Escherichia coli elppa3 |
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Putative Escherichia coli elppa3 RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
| Sequence length: | GenBank #: | |
| Chromosome: | 4,964,566 bp | CP083517 |
| plasmid unnamed1: | 45,999 bp | CP083518 |
| plasmid unnamed4: | 110,153 bp | CP083521 |
| plasmid unnamed8: | 9,405 bp | CP083525 |
REBASE acronym: Ecoppa3
Org_num: 53951
All begin K9U06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9615 | type IV toxin-antitoxin system AbiEi family | |||
| 9620 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Ecoppa3ORF9625P |
| 9625 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Ecoppa3ORF9625P |
| 9630 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Ecoppa3ORF9625P |
| 9635 | ash family protein | |||
| plasmid unnamed1 | ||||
| 24180 | IS1-like element IS1A family transposase | |||
| 24185 | M | M.SflFF34ORF9300P (70% identity) | M.Ecoppa3ORF24185P | |
| 24190 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 625 | phosphohydrolase | |||
| 630 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecoppa3DcmP |
| 635 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecoppa3DcmP |
| 640 | drug/metabolite exporter YedA | |||
| 4170 | DUF3927 family protein | |||
| 4185 | M | M.EcosS9ORF10680P (100% identity) | A | M.Ecoppa3ORF4185P |
| 4190 | TrmB family transcriptional regulator | |||
| 6130 | helix-turn-helix domain-containing protein | |||
| 6135 | M | M.KpnYN1ORFGP (89% identity) | M.Ecoppa3ORF6135P | |
| 6140 | 71 aa hypothetical protein | |||
| 15430 | BREX-1 system phosphatase PglZ type A | |||
| 15435 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Ecoppa3ORF15435P |
| 15440 | BREX system P-loop protein BrxC | |||
| 16950 | cell division protein DamX | |||
| 16955 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecoppa3DamP |
| 16960 | ribulose-phosphate 3-epimerase | |||
| 17550 | DUF2556 family protein | |||
| 17555 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecoppa3ORF17555P |
| 17560 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed8 | ||||
| 25620 | 73 aa hypothetical protein | |||
| 25625 | M | M.StyR64ORFAP (99% identity) | M.Ecoppa3ORF25625P | |
| 25630 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed4 | ||||
| 25060 | 269 aa hypothetical protein | |||
| 25065 | M | M.Sso524ORF460P (100% identity) | GATC | M.Ecoppa3ORF25065P |
| 25070 | 76 aa hypothetical protein | |||