Salmonella enterica SZL 38 |
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Putative Salmonella enterica SZL 38 RM systems
Ref: Rakitin,A.L. et al. unpublished
REBASE ref # 33759
| Sequence length: | GenBank #: | |
| Chromosome: | 5,052,615 bp | CP085987 |
| plasmid pSZL38.1: | 79,333 bp | CP085986 |
REBASE acronym: SensSZL38
Org_num: 55152
All begin LKX03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12720 | restriction endonuclease | |||
| 12725 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SensSZL38ORF12730P |
| 12730 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SensSZL38ORF12730P |
| 12735 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SensSZL38ORF12730P |
| 12740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | PerC family transcriptional regulator | |||
| 1825 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.SensSZL38ORF1825P |
| 1830 | RusA family crossover junction | |||
| 2075 | phosphohydrolase | |||
| 2080 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SensSZL38DcmP |
| 2085 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SensSZL38DcmP |
| 2090 | drug/metabolite exporter YedA | |||
| 10580 | phage holin, lambda family | |||
| 10585 | M | M.Sens418ORF4980P (100% identity) | M.SensSZL38ORF10585P | |
| 10590 | 92 aa hypothetical protein | |||
| 10615 | LexA family transcriptional regulator | |||
| 10620 | M | M.SflN101ORF11410P (100% identity) | GATC | M.SensSZL38ORF10620P |
| 10625 | PerC family transcriptional regulator | |||
| 12880 | BREX system P-loop protein BrxC | |||
| 12885 | RM | StyUK1IV (100% identity) | GATCAG | SensSZL38ORF12885P |
| 12890 | AAA family ATPase | |||
| 18545 | cell division protein DamX | |||
| 18550 | M | M.StyTDamP (100% identity) | GATC | M.SensSZL38DamP |
| 18555 | ribulose-phosphate 3-epimerase | |||
| 19040 | DUF2556 family protein | |||
| 19045 | M | M.StyUK1III (100% identity) | ATGCAT | M.SensSZL38ORF19045P |
| 19050 | DNA-binding transcriptional regulator Fis | |||
| 19960 | DUF2732 domain-containing protein | |||
| 19965 | M | M.SensSPORFFP (100% identity) | GATC | M.SensSZL38ORF19965P |
| 19970 | replication endonuclease | |||
| 20465 | thermonuclease family protein | |||
| 20470 | M | M.StyCORF187P (49% identity) | M.SensSZL38ORF20470P | |
| 20475 | IS6-like element IS26 family transposase | |||
| 23105 | Com family DNA-binding transcriptional | |||
| 23110 | M | M.SenRpsORFAP (100% identity) | M.SensSZL38ORF23110P | |
| 23115 | ribosome-associated translation inhibitor RaiA | |||
| 23335 | ead/Ea22-like family protein | |||
| 23340 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SensSZL38ORF23340P |
| 23345 | DUF551 domain-containing protein | |||
| plasmid pSZL38.1 | ||||
| 270 | recombination-associated protein RdgC | |||
| 275 | M | M.Eco34C14ORF22605P (99% identity) | M.SensSZL38ORF275P | |
| 290 | TerB family tellurite resistance protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10240 | small effector SsaA | |||
| 10245 | R | StyUK1IP (99% identity) | CAGAG | SensSZL38ORF10250P |
| 10250 | M | M.StyUK1I (100% identity) | CAGAG | M.SensSZL38ORF10250P |
| 10255 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12715 | BrnT family toxin | |||
| 12720 | R | StyUK1MrrP (100% identity) | SensSZL38MrrP | |
| 12725 | type I restriction-modification system | |||