Clostridium species M62/1 FDAARGOS_1583 |
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Putative Clostridium species M62/1 FDAARGOS_1583 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 33089
Complete sequence: 3,892,014 bp
GenBank #: CP085988
REBASE acronym: Cse1583
Org_num: 53230
All begin LK436_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3360 | site-specific integrase | |||
| 3365 | S | S1.PmeBin148ORFCP (54% identity) | S4.Cse1583ORF3385P | |
| 3370 | S | S2.PmeBin148ORFCP (88% identity) | S3.Cse1583ORF3385P | |
| 3375 | S | S1.PmeBin148ORFCP (45% identity) | S2.Cse1583ORF3385P | |
| 3380 | S | S3.PmeBin148ORFCP (47% identity) | S1.Cse1583ORF3385P | |
| 3385 | M | M.PmeBin148ORFCP (100% identity) | M.Cse1583ORF3385P | |
| 3390 | R | PmeBin148ORFCP (99% identity) | Cse1583ORF3385P | |
| 3395 | NYN domain-containing protein | |||
| 5135 | helix-turn-helix domain-containing protein | |||
| 5140 | R | Bsp1006ORF6135P (68% identity) | Cse1583ORF5145P | |
| 5145 | M | M.PmeBin668ORFAP (75% identity) | M.Cse1583ORF5145P | |
| 5150 | S | S.Fne10723I (41% identity) | S1.Cse1583ORF5145P | |
| 5155 | tyrosine-type recombinase/integrase | |||
| 5160 | S | S.Tpy2012ORF1970P (25% identity) | S2.Cse1583ORF5145P | |
| 5165 | S | S.FnuM3788ORF8555P (23% identity) | S3.Cse1583ORF5145P | |
| 5170 | MmcQ/YjbR family DNA-binding protein | |||
| 7940 | helix-turn-helix domain-containing protein | |||
| 7945 | M | M.EspMGS26ORFHP (97% identity) | M.Cse1583ORF7945P | |
| 7950 | S | S.Psp2237ORF2454P (42% identity) | S.Cse1583ORF7945P | |
| 7955 | R | EspMGS26ORFHP (98% identity) | Cse1583ORF7945P | |
| 7960 | 698 aa hypothetical protein | |||
| 15610 | helix-turn-helix transcriptional regulator | |||
| 15615 | M | M.Ccf10ORF14440P (100% identity) | M.Cse1583ORF15615P | |
| 15620 | S | S3.Ccf10ORF14440P (78% identity) | S1.Cse1583ORF15615P | |
| 15625 | R | Lba1585ORF12815P (94% identity) | Cse1583ORF15615P | |
| 15630 | S | S1.Tfr49748IIIP (55% identity) | S2.Cse1583ORF15615P | |
| 15635 | prolyl-tRNA synthetase associated | |||
| 16485 | low molecular weight phosphotyrosine protein | |||
| 16490 | S | S.UbaSM4ORFCP (90% identity) | S.Cse1583ORF16490P | |
| 16495 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 215 | 227 aa hypothetical protein | |||
| 220 | M | M.Lba1704ORFHP (73% identity) | M.Cse1583ORF220P | |
| 225 | type II toxin-antitoxin system PemK/MazF family | |||
| 280 | tyro protein tyrosine kinase-binding protein | |||
| 285 | M | M.Cse1583ORF18100P (100% identity) | M.Cse1583ORF285P | |
| 290 | DUF1492 domain-containing protein | |||
| 1350 | SpoVG family protein | |||
| 1355 | M | M.PmeBin147ORFCP (98% identity) | M.Cse1583ORF1355P | |
| 1360 | 247 aa hypothetical protein | |||
| 1895 | PrgI family protein | |||
| 1900 | M | M.PmeBin148ORFAP (82% identity) | M.Cse1583ORF1900P | |
| 1905 | 289 aa hypothetical protein | |||
| 2415 | antirestriction protein ArdA | |||
| 2420 | M | M.Lba1585ORF10095P (81% identity) | M.Cse1583ORF2420P | |
| 2425 | AbrB/MazE/SpoVT family DNA-binding | |||
| 2520 | DUF4406 domain-containing protein | |||
| 2525 | M | M.PmeBin87ORFAP (67% identity) | M.Cse1583ORF2525P | |
| 2530 | 4-oxalocrotonate tautomerase | |||
| 3265 | 289 aa hypothetical protein | |||
| 3270 | M | M.PmeBin165ORFBP (95% identity) | M.Cse1583ORF3270P | |
| 3275 | 162 aa hypothetical protein | |||
| 3290 | nitrogen fixation protein | |||
| 3295 | M | M.FprFp28ORFIP (94% identity) | M.Cse1583ORF3295P | |
| 3300 | NlpC/P60 family protein | |||
| 6155 | VWA domain-containing protein | |||
| 6160 | M | M.UbaSM4ORFAP (89% identity) | M.Cse1583ORF6160P | |
| 6165 | R | Ccf10ORF12590P (99% identity) | Cse1583ORF6160P | |
| 6170 | cyclopropane-fatty-acyl-phospholipid synthase | |||
| 11735 | DrmE family protein | |||
| 11740 | M | M.PmeBin206ORFCP (63% identity) | M.Cse1583ORF11740P | |
| 11745 | type II toxin-antitoxin system VapB family | |||
| 11965 | ATP-binding protein | |||
| 11970 | M | M.Sin30303ORF6845P (100% identity) | CCSSGG | M.Cse1583ORF11970P |
| 11975 | CHAP domain-containing protein | |||
| 18030 | 227 aa hypothetical protein | |||
| 18035 | M | M.Lba1704ORFHP (73% identity) | M.Cse1583ORF18035P | |
| 18040 | type II toxin-antitoxin system PemK/MazF family | |||
| 18095 | tyro protein tyrosine kinase-binding protein | |||
| 18100 | M | M.Cse1583ORF285P (100% identity) | M.Cse1583ORF18100P | |
| 18105 | DUF1492 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3395 | NYN domain-containing protein | |||
| 3400 | R | PmeBin382McrCP (81% identity) | Cse1583McrCP | |
| 3405 | R | PmeBin387McrBP (79% identity) | Cse1583McrBP | |
| 3410 | helix-turn-helix transcriptional regulator | |||
| 15445 | 274 aa hypothetical protein | |||
| 15450 | R | UbaSM4McrCP (99% identity) | Cse1583McrC2P | |
| 15455 | R | Ccf10McrBP (98% identity) | Cse1583McrB2P | |
| 15460 | ribokinase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 240 | single-stranded DNA-binding protein | |||
| 245 | M | M.FprA2165ORF4655P (100% identity) | M.Cse1583ORF245P | |
| 250 | DNA gyrase | |||
| 18055 | single-stranded DNA-binding protein | |||
| 18060 | M | M.FprA2165ORF4655P (100% identity) | M.Cse1583ORF18060P | |
| 18065 | DNA gyrase | |||