Capnocytophaga ochracea FDAARGOS_1550 |
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Putative Capnocytophaga ochracea FDAARGOS_1550 RM systems
Ref: Sproer,C. et al. unpublished
REBASE ref # 33120
Complete sequence: 2,713,235 bp
GenBank #: CP085961
REBASE acronym: Coc1550
Org_num: 53147
All begin LK419_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7620 | peptide MFS transporter | |||
| 7625 | R | CspOS43ORF5P (97% identity) | Coc1550ORF7630P | |
| 7630 | M | M.CspOS43ORF5P (99% identity) | M.Coc1550ORF7630P | |
| 7635 | S | S2.Coc1550ORF7630P (56% identity) | S1.Coc1550ORF7630P | |
| 7640 | S | S1.Coc1550ORF7630P (56% identity) | S2.Coc1550ORF7630P | |
| 7645 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1010 | BREX-1 system adenine-specific | |||
| ??? | RM | CspKC1668ORF40P (81% identity) | Coc1550ORF1015P | |
| 1035 | 351 aa hypothetical protein | |||
| 2265 | chorismate synthase | |||
| 2270 | M | M2.CspF0512ORF1200P (92% identity) | M.Coc1550ORF2270P | |
| 2275 | type II restriction endonuclease | |||
| 7725 | DNA polymerase I | |||
| 7730 | R | Csp10638IIP (100% identity) | GAATTC | Coc1550ORF7735P |
| 7735 | M | M.Csp10638II (100% identity) | GAATTC | M.Coc1550ORF7735P |
| 7740 | class I SAM-dependent methyltransferase | |||
| 9140 | ferrochelatase | |||
| 9145 | M | M.Csp10654I (99% identity) | CATG | M.Coc1550ORF9145P |
| 9150 | 286 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 855 | winged helix-turn-helix transcriptional | |||
| 860 | R | Csp323McrBP (98% identity) | Coc1550McrBP | |
| 865 | R | Cla11458McrCP (97% identity) | Coc1550McrCP | |
| 870 | class I SAM-dependent methyltransferase | |||