Lachnospiraceae bacterium GAM79 FDAARGOS_1582 |
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Putative Lachnospiraceae bacterium GAM79 FDAARGOS_1582 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 33089
Complete sequence: 2,979,054 bp
GenBank #: CP085929
REBASE acronym: Lba1582
Org_num: 54414
All begin LK424_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2890 | helix-turn-helix transcriptional regulator | |||
| 2895 | M | M.Lba1585ORF12815P (100% identity) | M.Lba1582ORF2895P | |
| 2900 | S | S1.Lba1585ORF12815P (100% identity) | S1.Lba1582ORF2895P | |
| 2905 | S | S2.Lba1585ORF12815P (100% identity) | S2.Lba1582ORF2895P | |
| 2910 | tyrosine-type recombinase/integrase | |||
| 2915 | S | S3.Lba1585ORF12815P (100% identity) | S3.Lba1582ORF2895P | |
| 2920 | haloacid dehalogenase-like hydrolase | |||
| 2925 | R | Lba1585ORF12815P (100% identity) | Lba1582ORF2895P | |
| 2930 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | 4-oxalocrotonate tautomerase | |||
| 50 | M | M.Lba1585ORF9980P (100% identity) | M.Lba1582ORF50P | |
| 55 | DUF4406 domain-containing protein | |||
| 160 | 86 aa hypothetical protein | |||
| 165 | M | M.Lba1585ORF10095P (100% identity) | M.Lba1582ORF165P | |
| 170 | DUF5688 family protein | |||
| 3570 | 190 aa hypothetical protein | |||
| 3575 | M | M.RspCY1ORF5875P (100% identity) | M.Lba1582ORF3575P | |
| 3580 | amidoligase family protein | |||
| 3610 | 257 aa hypothetical protein | |||
| 3615 | M | M.PmeBin60ORFFP (98% identity) | M.Lba1582ORF3615P | |
| 3620 | 110 aa hypothetical protein | |||
| 4110 | IS30 family transposase | |||
| 4115 | C | C.Lba1585ORF775P (100% identity) | C.Lba1582ORF4120P | |
| 4120 | M | M.Lba1585ORF775P (100% identity) | M.Lba1582ORF4120P | |
| 4125 | DISARM system SNF2-like helicase DrmD | |||
| 5695 | 1235 aa hypothetical protein | |||
| 5700 | R | R1.Lba1585ORF2365P (100% identity) | R1.Lba1582ORF5710P | |
| 5705 | R | R2.Lba1585ORF2365P (100% identity) | R2.Lba1582ORF5710P | |
| 5710 | M | M.Lba1585ORF2365P (100% identity) | M.Lba1582ORF5710P | |
| 5715 | 367 aa hypothetical protein | |||
| 13315 | 4-oxalocrotonate tautomerase | |||
| 13320 | M | M.Lba1585ORF9980P (100% identity) | M.Lba1582ORF13320P | |
| 13325 | DUF4406 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4125 | DISARM system SNF2-like helicase DrmD | |||
| 4130 | M | M.Lba1585ORF785P (100% identity) | M.Lba1582ORF4130P | |
| 4135 | R | Lba1585ORF785P (100% identity) | Lba1582ORF4130P | |
| 4140 | DISARM system helicase DrmA | |||