Salmonella enterica subsp. enterica serovar Enteritidis Clefairy |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis Clefairy RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,711,668 bp
GenBank #: CP085818
REBASE acronym: SenClef
Org_num: 55206
All begin LJF66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2555 | endonuclease NucS | |||
| 2560 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenClefORF2570P |
| 2565 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenClefORF2570P |
| 2570 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenClefORF2570P |
| 2575 | NERD domain-containing protein/DEAD/DEAH box | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2435 | IS3 family transposase | |||
| 2440 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenClefORF2440P |
| 2445 | YebC/PmpR family DNA-binding transcriptional | |||
| 8180 | phosphohydrolase | |||
| 8185 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenClefDcmP |
| 8190 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenClefDcmP |
| 8195 | drug/metabolite exporter YedA | |||
| 13090 | RusA family crossover junction | |||
| 13095 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenClefORF13095P |
| 13100 | PerC family transcriptional regulator | |||
| 19985 | DNA-binding transcriptional regulator Fis | |||
| 19990 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenClefORF19990P |
| 19995 | DUF2556 family protein | |||
| 20475 | ribulose-phosphate 3-epimerase | |||
| 20480 | M | M.StyTDamP (100% identity) | GATC | M.SenClefDamP |
| 20485 | cell division protein DamX | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16800 | replication endonuclease | |||
| 16805 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenClefORF16805P |
| 16810 | 3-5 exonuclease | |||