Salmonella enterica subsp. enterica serovar Enteritidis Clefable |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis Clefable RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,711,503 bp
GenBank #: CP085817
REBASE acronym: SenCle
Org_num: 55205
All begin LJF67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5485 | endonuclease NucS | |||
| 5490 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenCleORF5500P |
| 5495 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenCleORF5500P |
| 5500 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenCleORF5500P |
| 5505 | NERD domain-containing protein/DEAD/DEAH box | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 440 | ribulose-phosphate 3-epimerase | |||
| 445 | M | M.StyTDamP (100% identity) | GATC | M.SenCleDamP |
| 450 | cell division protein DamX | |||
| 5365 | IS3 family transposase | |||
| 5370 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenCleORF5370P |
| 5375 | YebC/PmpR family DNA-binding transcriptional | |||
| 11110 | phosphohydrolase | |||
| 11115 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenCleDcmP |
| 11120 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenCleDcmP |
| 11125 | drug/metabolite exporter YedA | |||
| 16020 | RusA family crossover junction | |||
| 16025 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenCleORF16025P |
| 16030 | PerC family transcriptional regulator | |||
| 22935 | DNA-binding transcriptional regulator Fis | |||
| 22940 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenCleORF22940P |
| 22945 | DUF2556 family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19750 | replication endonuclease | |||
| 19755 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenCleORF19755P |
| 19760 | 3-5 exonuclease | |||