|
Putative Salmonella enterica subsp. enterica serovar Enteritidis Froakie RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,679,287 bp
GenBank #: CP085796
REBASE acronym: SenFro
Org_num: 55207
All begin LJF57_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5485 | endonuclease NucS | |||
5490 | R | SenIvyORF21150P (100% identity) | GGYANNNNNNTCG | SenFroORF5500P |
5495 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenFroORF5500P |
5500 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenFroORF5500P |
5505 | NERD domain-containing protein/DEAD/DEAH box | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
440 | ribulose-phosphate 3-epimerase | |||
445 | M | M.StyTDamP (100% identity) | GATC | M.SenFroDamP |
450 | cell division protein DamX | |||
5365 | IS3 family transposase | |||
5370 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenFroORF5370P |
5375 | YebC/PmpR family DNA-binding transcriptional | |||
11110 | phosphohydrolase | |||
11115 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenFroDcmP |
11120 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenFroDcmP |
11125 | drug/metabolite exporter YedA | |||
16025 | RusA family crossover junction | |||
16030 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenFroORF16030P |
16035 | PerC family transcriptional regulator | |||
22695 | DNA-binding transcriptional regulator Fis | |||
22700 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenFroORF22700P |
22705 | DUF2556 family protein |