Phocaeicola vulgatus MG01-03 |
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Putative Phocaeicola vulgatus MG01-03 RM systems
Ref: Tanaka,K. et al. unpublished
REBASE ref # 33662
Complete sequence: 5,073,285 bp
GenBank #: AP025232
REBASE acronym: Pvu0103
Org_num: 54840
All begin GAIMETA21S03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 40520 | S | S5.Pvu0110ORF39490P (100% identity) | S5.Pvu0103ORF40560P | |
| 40530 | integrase | |||
| ??? | S | S3.Pvu3C24ORF1046P (100% identity) | S4.Pvu0103ORF40560P | |
| ??? | S | S2.Pvu1098ORF7795P (100% identity) | GAAGNNNNNNNTCC | S3.Pvu0103ORF40560P |
| ??? | S | S2.Pvu0110ORF39490P (100% identity) | GAAGNNNNNNNTCC | S2.Pvu0103ORF40560P |
| 40550 | S | S1.Pvu0110ORF39490P (100% identity) | S1.Pvu0103ORF40560P | |
| 40560 | M | M.Pvu0110ORF39490P (100% identity) | M.Pvu0103ORF40560P | |
| 40570 | R | Pvu0110ORF39490P (100% identity) | Pvu0103ORF40560P | |
| 40580 | 579 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30510 | 92 aa hypothetical protein | |||
| 30520 | M | M1.Bvu10583ORF594P (89% identity) | M1.Pvu0103ORF30520P | |
| 30530 | M | M1.PmeBin358ORFBP (99% identity) | M2.Pvu0103ORF30520P | |
| 30540 | 130 aa hypothetical protein | |||
| 34640 | 747 aa hypothetical protein | |||
| 34650 | R | Pvu0110ORF35280P (100% identity) | Pvu0103ORF34660P | |
| 34660 | M | M.Pvu0110ORF35280P (100% identity) | M.Pvu0103ORF34660P | |
| 34670 | C | C.Pvu0110ORF35280P (100% identity) | C.Pvu0103ORF34660P | |
| 34680 | 200 aa hypothetical protein | |||
| 34680 | 200 aa hypothetical protein | |||
| 34690 | RM | Pvu0110ORF35310P (100% identity) | Pvu0103ORF34690P | |
| 34700 | 117 aa hypothetical protein | |||
| 38960 | conjugative transposon protein TraN | |||
| 38970 | M | M2.Pvu0110ORF5730P (100% identity) | M1.Pvu0103ORF38970P | |
| 38980 | 117 aa hypothetical protein | |||
| 38990 | conjugative transposon protein TraM | |||
| 39000 | 119 aa hypothetical protein | |||
| 39010 | conjugative transposon protein TraK | |||
| 39020 | 377 aa hypothetical protein | |||
| 39030 | DUF5045 domain-containing protein | |||
| 39040 | M | M1.Pvu0110ORF5730P (100% identity) | M2.Pvu0103ORF38970P | |
| 39050 | 240 aa hypothetical protein | |||