Escherichia coli 2017.11.01CC |
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Putative Escherichia coli 2017.11.01CC RM systems
Ref: Yamamoto,Y. et al. unpublished
REBASE ref # 33267
| Sequence length: | GenBank #: | |
| Chromosome: | 4,733,210 bp | AP025220 |
| plasmid p20171101CC-1: | 129,419 bp | AP025221 |
REBASE acronym: Eco1101CC
Org_num: 53265
All begin VEGS20_, VEGS20_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34890 | 962 aa hypothetical protein | |||
| 34900 | R | KpnEGKP3ORF20260P (99% identity) | Eco1101CCORF34900P | |
| 34910 | 395 aa hypothetical protein | |||
| 34920 | S | S.EcoMB52ORF17080P (64% identity) | S.Eco1101CCORF34900P | |
| 34930 | IS5 family transposase | |||
| 38170 | Mrr restriction system protein | |||
| 38180 | R | EcosS142ORF37770P (100% identity) | Eco1101CCORF38190P | |
| 38190 | M | M.EcosS142ORF37770P (100% identity) | M.Eco1101CCORF38190P | |
| 38200 | S | S.EcosS142ORF37770P (56% identity) | S.Eco1101CCORF38190P | |
| 38210 | insertion element IS1 4 protein InsA | |||
| plasmid p20171101CC-1 | ||||
| 45430 | 73 aa hypothetical protein | |||
| 45440 | M | M.EcoS1632ORFBP (100% identity) | M.Eco1101CCORF45440P | |
| 45450 | S | S.EcosS142ORF43560P (100% identity) | S.Eco1101CCORF45440P | |
| 45460 | R | EcoS1632ORFBP (100% identity) | Eco1101CCORF45440P | |
| 45470 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3150 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1101CCDamP |
| 3170 | ribulose-phosphate 3-epimerase | |||
| 4330 | acrEF/envCD operon repressor | |||
| 4340 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1101CCORF4340P |
| 4350 | DNA-binding protein Fis | |||
| 17470 | 231 aa hypothetical protein | |||
| 17480 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1101CCDcmP |
| 17490 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco1101CCDcmP |
| 17500 | inner membrane transporter YedA | |||
| 28910 | replication endonuclease from | |||
| 28920 | M | M.EcoSTEC506ORF16525P (100% identity) | GATC | M.Eco1101CCORF28920P |
| 28930 | 75 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26940 | IS5 family transposase | |||
| 26950 | R | SflN97McrCP (100% identity) | Eco1101CCMcrCP | |
| 26960 | R | SflN97McrBP (100% identity) | Eco1101CCMcrBP | |
| 26970 | 141 aa hypothetical protein | |||
| 38160 | GTP-binding protein YjiA | |||
| 38170 | R | SenHNK130MrrP (100% identity) | Eco1101CCMrrP | |
| 38180 | type I restriction enzyme EcoKI R protein | |||
| 38160 | GTP-binding protein YjiA | |||
| 38170 | R | SenHNK130MrrP (100% identity) | Eco1101CCMrr2P | |
| 38180 | type I restriction enzyme EcoKI R protein | |||