Escherichia coli EC7518 |
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Putative Escherichia coli EC7518 RM systems
Ref: Lin,Q. unpublished
REBASE ref # 33379
| Sequence length: | GenBank #: | |
| Chromosome: | 4,941,244 bp | CP085183 |
| plasmid pEC7518-111k: | 111,696 bp | CP085184 |
| plasmid pEC7518-49k: | 49,706 bp | CP085186 |
REBASE acronym: EcoEC7518
Org_num: 53762
All begin LIN51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4020 | transposase | |||
| 4025 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoEC7518ORF4030P |
| 4030 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoEC7518ORF4030P |
| 4035 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoEC7518ORF4030P |
| 4040 | AAA family ATPase | |||
| 18415 | restriction endonuclease subunit S | |||
| 18420 | M | M.Eco974ORF13120P (100% identity) | M.EcoEC7518ORF18420P | |
| 18425 | GTPase family protein | |||
| 20515 | IS1-like element IS1A family transposase | |||
| 20520 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoEC7518ORF20525P |
| 20525 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoEC7518ORF20525P |
| 20530 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoEC7518ORF20525P |
| 20535 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.EcoTH9F11ORF2180P (100% identity) | ATGCAT | M.EcoEC7518ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 9820 | phosphohydrolase | |||
| 9825 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoEC7518DcmP |
| 9830 | V | V.EcoTH9F11DcmP (100% identity) | CCWGG | V.EcoEC7518DcmP |
| 9835 | drug/metabolite exporter YedA | |||
| 20630 | AAA family ATPase | |||
| 20635 | R | EcoVL07ORF22520P (43% identity) | EcoEC7518ORF20635BP | |
| 20640 | IS4 family transposase | |||
| 20645 | R | SflN101ORF11875P (57% identity) | EcoEC7518ORF20635AP | |
| 20650 | HNH endonuclease | |||
| plasmid pEC7518-49k | ||||
| 25090 | 97 aa hypothetical protein | |||
| 25095 | M | M.Xca80ORFEP (100% identity) | M.EcoEC7518ORF25095P | |
| 25100 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18650 | transposase | |||
| 18655 | R | SflN97McrCP (100% identity) | EcoEC7518McrCP | |
| 18660 | R | SflN97McrBP (99% identity) | EcoEC7518McrBP | |
| 18665 | zinc-ribbon domain-containing protein | |||
| 20620 | IS6-like element IS26 family transposase | |||
| 20625 | R | EcoWMcrCP (34% identity) | EcoEC7518McrC2P | |
| 20630 | R | SflN101McrBP (100% identity) | EcoEC7518McrB2P | |
| 20635 | HNH endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pEC7518-111k | ||||
| 24470 | 76 aa hypothetical protein | |||
| 24475 | M | M.EcoLR48ORF45220P (100% identity) | GATC | M.EcoEC7518ORF24475P |
| 24480 | 269 aa hypothetical protein | |||