Escherichia coli isolate 127 |
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Putative Escherichia coli isolate 127 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 5,131,774 bp | HG994851 |
| chromosome main: | 5,184,627 bp | HG994850 |
REBASE acronym:
Org_num:
All begin AI2831V1_, AI2938V1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 2928 | 81 aa hypothetical protein | |||
| 2929 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Ecoi127ORF2929P |
| 2930 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Ecoi127ORF2929P |
| 2931 | 218 aa hypothetical protein | |||
| 2932 | 355 aa hypothetical protein | |||
| 2933 | R | Ecoi127aORF2948P (100% identity) | GAGNNNNNGTTY | Ecoi127ORF2929P |
| 2934 | 238 aa hypothetical protein | |||
| chromosome main | ||||
| 2947 | 81 aa hypothetical protein | |||
| 2948 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Ecoi127aORF2948P |
| 2949 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Ecoi127aORF2948P |
| 2950 | 218 aa hypothetical protein | |||
| 2951 | 355 aa hypothetical protein | |||
| 2952 | R | Ecoi127ORF2929P (100% identity) | GAGNNNNNGTTY | Ecoi127aORF2948P |
| 2953 | 238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 338 | Cell division protein DamX | |||
| 339 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecoi127DamP |
| 340 | Ribulose-phosphate 3-epimerase | |||
| 454 | 59 aa hypothetical protein | |||
| 455 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Ecoi127ORF455P |
| 456 | DNA-binding protein Fis | |||
| 1278 | 73 aa hypothetical protein | |||
| 1279 | M | M1.Ecoi127aORF1280P (100% identity) | M1.Ecoi127ORF1279P | |
| 1280 | 98 aa hypothetical protein | |||
| ??? | M | M2.Ecoi127aORF1280P (100% identity) | M2.Ecoi127ORF1279P | |
| 1282 | 106 aa hypothetical protein | |||
| 1915 | 231 aa hypothetical protein | |||
| 1916 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecoi127DcmP |
| 1917 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecoi127DcmP |
| 1918 | inner membrane transporter YedA | |||
| 3944 | 108 aa hypothetical protein | |||
| 3945 | M | M.Ecoi127aORF3990P (100% identity) | M.Ecoi127ORF3945P | |
| 3946 | 67 aa hypothetical protein | |||
| 3953 | LexA repressor | |||
| 3954 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Ecoi127ORF3954P |
| 3955 | 162 aa hypothetical protein | |||
| 4030 | 9-O-acetyl-N-acetylneuraminic acid | |||
| 4031 | R | Ecoi127aORF4076P (100% identity) | Ecoi127ORF4031P | |
| 4032 | 678 aa hypothetical protein | |||
| 4091 | 118 aa hypothetical protein | |||
| 4092 | M | M.Mxa6833447ORFBP (99% identity) | M.Ecoi127ORF4092P | |
| 4093 | R | EcosS3ORF15775P (98% identity) | Ecoi127ORF4092P | |
| 4094 | 555 aa hypothetical protein | |||
| chromosome main | ||||
| 337 | Cell division protein DamX | |||
| 338 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecoi127aDamP |
| 339 | Ribulose-phosphate 3-epimerase | |||
| 453 | 59 aa hypothetical protein | |||
| 454 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Ecoi127aORF454P |
| 455 | DNA-binding protein Fis | |||
| 1279 | 73 aa hypothetical protein | |||
| 1280 | M | M1.Ecoi127ORF1279P (100% identity) | M1.Ecoi127aORF1280P | |
| 1281 | 98 aa hypothetical protein | |||
| ??? | M | M2.Ecoi127ORF1279P (100% identity) | M2.Ecoi127aORF1280P | |
| 1283 | 106 aa hypothetical protein | |||
| 1932 | 231 aa hypothetical protein | |||
| 1933 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecoi127aDcmP |
| 1934 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecoi127aDcmP |
| 1935 | inner membrane transporter YedA | |||
| 3989 | 108 aa hypothetical protein | |||
| 3990 | M | M.Ecoi127ORF3945P (100% identity) | M.Ecoi127aORF3990P | |
| 3991 | 67 aa hypothetical protein | |||
| 3998 | LexA repressor | |||
| 3999 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Ecoi127aORF3999P |
| 4000 | 162 aa hypothetical protein | |||
| 4075 | 9-O-acetyl-N-acetylneuraminic acid | |||
| 4076 | R | Ecoi127ORF4031P (100% identity) | Ecoi127aORF4076P | |
| 4077 | 678 aa hypothetical protein | |||
| 4136 | 118 aa hypothetical protein | |||
| 4137 | M | M.Mxa6833447ORFBP (99% identity) | M.Ecoi127aORF4137P | |
| 4138 | R | EcosS3ORF15775P (98% identity) | Ecoi127aORF4137P | |
| 4139 | 555 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 2655 | 113 aa hypothetical protein | |||
| 2656 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Ecoi127ORF2656P |
| 2657 | 146 aa hypothetical protein | |||
| chromosome main | ||||
| 2675 | 113 aa hypothetical protein | |||
| 2676 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Ecoi127aORF2676P |
| 2677 | 146 aa hypothetical protein | |||