Klebsiella pneumoniae SB612 |
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Putative Klebsiella pneumoniae SB612 RM systems
Ref: Hawkey,J. et al. unpublished
REBASE ref # 33463
| Sequence length: | GenBank #: | |
| Chromosome: | 5,324,939 bp | CP084830 |
| plasmid pKp_SB612_1: | 172,669 bp | CP084831 |
| plasmid pKp_SB612_2: | 131,535 bp | CP084832 |
| plasmid pKp_SB612_3: | 111,507 bp | CP084833 |
| plasmid pKp_SB612_4: | 109,813 bp | CP084834 |
REBASE acronym: KpnSB612
Org_num: 54293
All begin LGM16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKp_SB612_2 | ||||
| 27535 | DUF262 domain-containing HNH endonuclease family | |||
| 27540 | M | M.Sma854ORF28660P (100% identity) | GATTNNNNNNNTCG | M.KpnSB612ORF27540P |
| 27545 | S | S.Kqu610ORF28695P (100% identity) | GATTNNNNNNNTCG | S.KpnSB612ORF27540P |
| 27550 | R | Kqu610ORF28695P (100% identity) | GATTNNNNNNNTCG | KpnSB612ORF27540P |
| 27555 | IS6-like element IS26 family transposase | |||
| plasmid pKp_SB612_3 | ||||
| 28035 | DUF262 domain-containing protein | |||
| 28040 | M | M.KpnSB611ORF27710P (100% identity) | M.KpnSB612ORF28040P | |
| 28045 | S | S.KpnSB611ORF27710P (100% identity) | S.KpnSB612ORF28040P | |
| 28050 | R | KpnSB611ORF27710P (100% identity) | KpnSB612ORF28040P | |
| 28055 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1945 | cell division protein DamX | |||
| 1950 | M | M.KspC31DamP (100% identity) | GATC | M.KpnSB612DamP |
| 1955 | ribulose-phosphate 3-epimerase | |||
| 7110 | recombination protein NinG | |||
| 7115 | M | M.KquS1741ORFCP (100% identity) | GATC | M.KpnSB612ORF7115P |
| 7120 | antitermination protein | |||
| 8870 | phosphohydrolase | |||
| 8875 | M | M.Ksp54798DcmP (100% identity) | CCWGG | M.KpnSB612DcmP |
| 8880 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnSB612DcmP |
| 8885 | drug/metabolite exporter YedA | |||
| 9075 | 50 aa hypothetical protein | |||
| 9080 | M | M.KpnNIH49ORF9115P (100% identity) | M.KpnSB612ORF9080P | |
| 9085 | 76 aa hypothetical protein | |||
| 15675 | replication endonuclease | |||
| 15680 | M | M.KquWP1ORF15300P (99% identity) | M.KpnSB612ORF15680P | |
| 15685 | 3-5 exoribonuclease | |||
| plasmid pKp_SB612_1 | ||||
| 26850 | 73 aa hypothetical protein | |||
| 26855 | M | M.SmaBWH35ORF25885P (100% identity) | M.KpnSB612ORF26855P | |
| 26860 | 67 aa hypothetical protein | |||
| plasmid pKp_SB612_3 | ||||
| 28085 | 77 aa hypothetical protein | |||
| 28090 | M | M.Kqu610ORF27200P (100% identity) | M.KpnSB612ORF28090P | |
| 28095 | 280 aa hypothetical protein | |||
| plasmid pKp_SB612_4 | ||||
| 28795 | 73 aa hypothetical protein | |||
| 28800 | M | M.SmaBWH35ORF25885P (100% identity) | M.KpnSB612ORF28800P | |
| 28805 | 56 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKp_SB612_1 | ||||
| 26145 | IS3 family transposase | |||
| 26150 | R | SmaBWH35McrBP (100% identity) | KpnSB612McrBP | |
| 26155 | R | SmaBWH35McrCP (100% identity) | KpnSB612McrCP | |
| 26160 | IS5 family transposase | |||
| plasmid pKp_SB612_2 | ||||
| 27240 | IS110 family transposase | |||
| 27245 | R | SmaBWH35McrCP (99% identity) | KpnSB612McrC2P | |
| 27250 | R | SmaBWH35McrBP (100% identity) | KpnSB612McrB2P | |
| 27255 | IS3 family transposase | |||