Klebsiella quasipneumoniae subsp. similipneumoniae SB610 |
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Putative Klebsiella quasipneumoniae subsp. similipneumoniae SB610 RM systems
Ref: Hawkey,J. et al. unpublished
REBASE ref # 33463
| Sequence length: | GenBank #: | |
| Chromosome: | 5,255,898 bp | CP084770 |
| plasmid pKqs_SB610_1: | 224,856 bp | CP084771 |
| plasmid pKqs_SB610_2: | 111,997 bp | CP084772 |
| plasmid pKqs_SB610_3: | 150,964 bp | CP084773 |
| plasmid pKqs_SB610_4: | 124,980 bp | CP084774 |
| plasmid pKqs_SB610_5: | 94,734 bp | CP084775 |
| plasmid pKqs_SB610_6: | 84,354 bp | CP084776 |
REBASE acronym: Kqu610
Org_num: 54394
All begin LGM29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5275 | 189 aa hypothetical protein | |||
| 5280 | R | KpnI009ORF5295P (100% identity) | GGANNNNNCTC | Kqu610ORF5290P |
| 5285 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Kqu610ORF5290P |
| 5290 | M | M.KpnS1313ORF16435P (60% identity) | GGANNNNNCTC | M.Kqu610ORF5290BP |
| 5295 | IS3 family transposase | |||
| 5300 | M | M.SmaWVU7ORF2310P (39% identity) | GGANNNNNCTC | M.Kqu610ORF5290AP |
| 5305 | 119 aa hypothetical protein | |||
| plasmid pKqs_SB610_2 | ||||
| 27145 | DUF262 domain-containing protein | |||
| 27150 | M | M.Kpni405hORF5383P (100% identity) | M.Kqu610ORF27150P | |
| 27155 | S | S.Kpni405hORF5383P (100% identity) | S.Kqu610ORF27150P | |
| 27160 | R | Kpni405hORF5383P (100% identity) | Kqu610ORF27150P | |
| 27165 | 71 aa hypothetical protein | |||
| plasmid pKqs_SB610_3 | ||||
| 28030 | ISL3 family transposase | |||
| 28035 | R | KvaT2ORF29845P (100% identity) | Kqu610ORF28045P | |
| 28040 | S | S.Ror23ORF29040P (100% identity) | S.Kqu610ORF28045P | |
| 28045 | M | M.Ror23ORF29040P (68% identity) | M.Kqu610ORF28045BP | |
| 28050 | IS110 family transposase | |||
| 28055 | IS5/IS1182 family transposase | |||
| 28060 | IS110 family transposase | |||
| 28065 | IS5-like element IS903 family transposase | |||
| 28070 | M | M.SenLG26II (32% identity) | M.Kqu610ORF28045AP | |
| 28075 | 76 aa hypothetical protein | |||
| plasmid pKqs_SB610_4 | ||||
| 28690 | DUF262 domain-containing HNH endonuclease family | |||
| 28695 | M | M.Sma854ORF28660P (100% identity) | GATTNNNNNNNTCG | M.Kqu610ORF28695P |
| 28700 | S | S.KpnSB612ORF27540P (100% identity) | GATTNNNNNNNTCG | S.Kqu610ORF28695P |
| 28705 | R | KpnSB612ORF27540P (100% identity) | GATTNNNNNNNTCG | Kqu610ORF28695P |
| 28710 | IS6-like element IS26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.KvaHKUDamP (100% identity) | GATC | M.Kqu610DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 8915 | phosphohydrolase | |||
| 8920 | M | M.KquMMCC7ORF8470P (100% identity) | CCWGG | M.Kqu610ORF8920P |
| 8925 | V | V.KspPCXDcmP (100% identity) | V.Kqu610ORF8920P | |
| 8930 | drug/metabolite exporter YedA | |||
| 14440 | 77 aa hypothetical protein | |||
| 14445 | M | M.KpnsKp6ORF14475P (100% identity) | M.Kqu610ORF14445P | |
| 14450 | 78 aa hypothetical protein | |||
| 16150 | 57 aa hypothetical protein | |||
| 16155 | M | M.Kpntgc02ORF19515P (99% identity) | M.Kqu610ORF16155P | |
| 16160 | 3-5 exoribonuclease | |||
| 22405 | HNH endonuclease | |||
| 22410 | R | KquPLORF15805P (98% identity) | Kqu610ORF22410P | |
| 22415 | type VI secretion system tube protein Hcp | |||
| plasmid pKqs_SB610_1 | ||||
| 25975 | DNA replication protein DnaC | |||
| 25980 | M | M.Ksp6FORF29980P (100% identity) | CCWGG | M.Kqu610ORF25980P |
| 25985 | R | KpnKP26ORF375P (99% identity) | CCWGG | Kqu610ORF25980P |
| 25990 | 82 aa hypothetical protein | |||
| plasmid pKqs_SB610_2 | ||||
| 27195 | 80 aa hypothetical protein | |||
| 27200 | M | M.KpnSB612ORF28090P (100% identity) | M.Kqu610ORF27200P | |
| 27205 | 280 aa hypothetical protein | |||
| plasmid pKqs_SB610_3 | ||||
| 28015 | 73 aa hypothetical protein | |||
| 28020 | M | M.SmaQC11ORF52800P (100% identity) | M.Kqu610ORF28020P | |
| 28025 | 56 aa hypothetical protein | |||
| plasmid pKqs_SB610_4 | ||||
| 28475 | IS1 family transposase | |||
| 28480 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kqu610ORF28480P |
| 28485 | R | Sen23701ORF24490P (100% identity) | CCWGG | Kqu610ORF28480P |
| 28490 | recombinase family protein | |||
| plasmid pKqs_SB610_5 | ||||
| 28915 | 73 aa hypothetical protein | |||
| 28920 | M | M.Ksp484ORF31915P (100% identity) | M.Kqu610ORF28920P | |
| 28925 | 65 aa hypothetical protein | |||
| plasmid pKqs_SB610_6 | ||||
| 29495 | 73 aa hypothetical protein | |||
| 29500 | M | M.RplGODAORF27180P (100% identity) | M.Kqu610ORF29500P | |
| 29505 | 56 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8640 | SpnT protein | |||
| 8645 | M | M.Cfr13639IV (96% identity) | GTCAGC | M.Kqu610ORF8645P |
| 8650 | R | Eho12ORF14280P (98% identity) | GTCAGC | Kqu610ORF8645P |
| 8655 | shufflon system plasmid conjugative transfer | |||