Mycoplasmopsis bovis RM16 |
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Putative Mycoplasmopsis bovis RM16 RM systems
Ref: Garcia-Galan,A. et al. unpublished
REBASE ref # 33618
Complete sequence: 994,478 bp
GenBank #: CP077758
REBASE acronym: MboRM16
Org_num: 54732
All begin FWK06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 995 | 108 aa hypothetical protein | |||
| 1000 | M | M.MbosMb1ORF1005P (51% identity) | M.MboRM16ORF1000AP | |
| 1005 | IS30 family transposase | |||
| 1010 | 73 aa hypothetical protein | |||
| 1015 | M | M.MbosMb1ORF1005P (49% identity) | M.MboRM16ORF1000BP | |
| 1020 | S | S.Mbos175ORF5445AP (87% identity) | S1.MboRM16ORF1000P | |
| 1025 | S | S1.MbosMb1ORF1005P (50% identity) | S2.MboRM16ORF1000P | |
| 1030 | R | MbosMb1ORF1005P (100% identity) | MboRM16ORF1000P | |
| 1035 | site-specific integrase | |||
| 1040 | S | S2.MboJ81ORF3310P (100% identity) | S3.MboRM16ORF1000P | |
| 1045 | ATP-binding protein | |||
| 1050 | S | S2.Mbo227ORF4195P (82% identity) | S4.MboRM16ORF1000P | |
| 1055 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | DNA polymerase III subunit delta | |||
| 1695 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboRM16ORF1695P |
| 1700 | R | MboJ6ORF1840P (100% identity) | CTAG | MboRM16ORF1695P |
| 1705 | 52 aa hypothetical protein | |||
| 2370 | 150 aa hypothetical protein | |||
| 2375 | M | M.MboVK16ORF2235P (100% identity) | M.MboRM16ORF2375P | |
| 2380 | R | MboVK16ORF2235P (100% identity) | MboRM16ORF2375P | |
| 2385 | excinuclease ABC subunit UvrB | |||
| 2545 | MFS transporter | |||
| 2550 | M | M.MboVK16ORF3575P (100% identity) | GANTC | M.MboRM16ORF2550P |
| 2555 | 76 aa hypothetical protein | |||
| 2830 | 30S ribosomal protein S16 | |||
| 2835 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M1.MboRM16ORF2835P |
| 2840 | M | M1.MboMJ4ORF3705P (100% identity) | GCATC | M2.MboRM16ORF2835P |
| 2845 | R | Mfbo651ORFDP (49% identity) | GCATC | R1.MboRM16ORF2835P |
| 2850 | IS3 family transposase | |||
| 2855 | R | R1.MbosMb1ORF3285P (100% identity) | R2.MboRM16ORF2835P | |
| 2860 | IS3 family transposase | |||
| 3145 | ribonuclease HIII | |||
| 3150 | M | M.MbosMb1ORF2980P (100% identity) | M.MboRM16ORF3150P | |
| 3155 | 62 aa hypothetical protein | |||
| 3595 | variable surface lipoprotein | |||
| 3600 | M | M.MboJ6ORF2975P (100% identity) | M.MboRM16ORF3600P | |
| 3605 | 30S ribosomal protein S2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 840 | 150 aa hypothetical protein | |||
| 845 | R | MbosMb1ORF815P (100% identity) | MboRM16ORF850P | |
| 850 | M | M1.MboMb1AORF830P (99% identity) | M1.MboRM16ORF850P | |
| 855 | M | M2.Mbo227ORF790P (100% identity) | M2.MboRM16ORF850P | |
| 860 | M | M3.Mbos193ORF800P (98% identity) | M3.MboRM16ORF850P | |
| 865 | trigger factor | |||
| 2675 | IS3 family transposase | |||
| 2680 | M | M.MboNADC59ORF4530P (23% identity) | M.MboRM16ORF2680BP | |
| 2685 | M | M.MboMJ2ORF3640P (77% identity) | M.MboRM16ORF2680AP | |
| 2690 | Fic family protein | |||