Echinicola species SCS 3-6 |
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Putative Echinicola species SCS 3-6 RM systems
Ref: Zhou,Z. unpublished
REBASE ref # 31649
Complete sequence: 5,693,670 bp
GenBank #: CP080025
REBASE acronym: EspSCS36
Org_num: 53423
All begin KZP23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1665 | 203 aa hypothetical protein | |||
| 1670 | M | M.Cfe21142ORF52292P (83% identity) | M.EspSCS36ORF1670P | |
| 1675 | S | S.Nsp870ORF30185P (31% identity) | S.EspSCS36ORF1670P | |
| 1680 | 454 aa hypothetical protein | |||
| 1685 | R | Cfe21142ORF52292P (85% identity) | EspSCS36ORF1670P | |
| 1690 | AAA family ATPase | |||
| 1880 | DUF4917 family protein | |||
| 1885 | S | S.Evi17526ORF382P (98% identity) | S.EspSCS36ORF1890P | |
| 1890 | M | M.Evi17526ORF382P (100% identity) | M.EspSCS36ORF1890P | |
| 1895 | virulence RhuM family protein | |||
| 1900 | R | Evi17526ORF382P (89% identity) | EspSCS36ORF1890P | |
| 1905 | C | C.Evi17526ORF382P (100% identity) | C.EspSCS36ORF1890P | |
| 1910 | 108 aa hypothetical protein | |||
| 9900 | IS66 family transposase | |||
| 9905 | M | M.Evi17526II (98% identity) | M.EspSCS36ORF9905P | |
| 9910 | S | S1.Emi86ORF9515P (39% identity) | S1.EspSCS36ORF9905P | |
| 9915 | S | S1.AspY33ORFCP (47% identity) | S2.EspSCS36ORF9905P | |
| 9920 | site-specific integrase | |||
| 9925 | Abi family protein | |||
| 9930 | R | Evi17526IIP (97% identity) | EspSCS36ORF9905P | |
| 9935 | winged helix-turn-helix domain-containing | |||
| 15710 | 66 aa hypothetical protein | |||
| 15715 | M | M.TspSZ18ORF405P (54% identity) | M1.EspSCS36ORF15715P | |
| 15720 | R | Fsp76ORFCP (68% identity) | EspSCS36ORF15715P | |
| 15725 | M | M.Apl11383ORF8805P (67% identity) | M2.EspSCS36ORF15715P | |
| 15730 | S | S.Tsp7BORF8790P (42% identity) | S.EspSCS36ORF15715P | |
| 15735 | 355 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16465 | helix-turn-helix domain-containing protein | |||
| 16470 | M | M2.Bst6EORFAP (73% identity) | M.EspSCS36ORF16470P | |
| 16475 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17635 | DNA binding domain-containing protein | |||
| 17640 | M | M.PspJZB09ORFHP (50% identity) | M.EspSCS36ORF17640P | |
| 17645 | C | C.OsiAW6ORFBP (66% identity) | C.EspSCS36ORF17640P | |
| 17650 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | type I restriction endonuclease subunit R | |||
| 1690 | R | TspUJ94McrBP (77% identity) | EspSCS36McrBP | |
| 1695 | R | TspUJ94McrC2P (81% identity) | EspSCS36McrCP | |
| 1700 | 352 aa hypothetical protein | |||