Escherichia coli O157:H7 Balcarce_24.2 |
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Putative Escherichia coli O157:H7 Balcarce_24.2 RM systems
Ref: Amadio,A.F. et al. unpublished
REBASE ref # 33396
Complete sequence: 5,457,079 bp
GenBank #: CP076245
REBASE acronym: EcoB242
Org_num: 53850
All begin JKN64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23545 | DUF262 domain-containing protein | |||
| 23550 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoB242ORF23555P |
| 23555 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoB242ORF23555P |
| 23560 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoB242ORF23555P |
| 23565 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2315 | cell division protein DamX | |||
| 2320 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoB242DamP |
| 2325 | ribulose-phosphate 3-epimerase | |||
| 2830 | DUF2556 family protein | |||
| 2835 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoB242ORF2835P |
| 2840 | DNA-binding transcriptional regulator Fis | |||
| 8670 | Rha family transcriptional regulator | |||
| 8675 | R | Sso1099IP (100% identity) | CTGCAG | EcoB242ORF8680P |
| 8680 | M | M.EcoSH3ORF25410P (100% identity) | CTGCAG | M.EcoB242ORF8680P |
| 8685 | LexA family transcriptional regulator | |||
| 9695 | recombination protein NinB | |||
| 9700 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoB242ORF9700P |
| 9705 | NinE family protein | |||
| 10500 | phosphohydrolase | |||
| 10505 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoB242DcmP |
| 10510 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoB242DcmP |
| 10515 | drug/metabolite exporter YedA | |||
| 14425 | DUF1737 domain-containing protein | |||
| 14435 | M | M.EcoTWORF1742P (100% identity) | M.EcoB242ORF14435P | |
| 14440 | TrmB family transcriptional regulator | |||
| 15675 | DUF1737 domain-containing protein | |||
| 15690 | M | M.Eco1226ORFHP (100% identity) | M.EcoB242ORF15690P | |
| 15695 | TrmB family transcriptional regulator | |||
| 23780 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoB242ORF23780P |
| 23785 | DEAD/DEAH box helicase | |||
| 23815 | N-acetylneuraminic acid mutarotase | |||
| 23820 | R | Ecos1613ORF26795P (100% identity) | EcoB242ORF23820P | |
| 23825 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23565 | endoribonuclease SymE | |||
| 23570 | R | EcosPA8GmrSDP (55% identity) | EcoB242GmrDP | |
| 23575 | R | Ecos1613GmrSP (100% identity) | EcoB242GmrSP | |
| 23580 | DUF1127 domain-containing protein | |||