Mycoplasmopsis bovis J6 |
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Putative Mycoplasmopsis bovis J6 RM systems
Ref: Garcia-Galan,A. et al. bioRxiv (2021)
REBASE ref # 33616
Complete sequence: 1,038,312 bp
GenBank #: CP068734
REBASE acronym: MboJ6
Org_num: 54724
All begin JNG56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1155 | 63 aa hypothetical protein | |||
| 1160 | M | M.MbosMb1ORF1005P (100% identity) | M.MboJ6ORF1160P | |
| 1165 | S | S3.MboC70ORF3525P (100% identity) | S1.MboJ6ORF1160P | |
| 1170 | R | MbosMb1ORF1005P (100% identity) | MboJ6ORF1160P | |
| 1175 | site-specific integrase | |||
| 1180 | S | S3.MboJ137ORF3565P (100% identity) | S2.MboJ6ORF1160P | |
| 1185 | ATP-binding protein | |||
| 1190 | S | S3.MboJ279ORF3710P (100% identity) | S3.MboJ6ORF1160P | |
| 1195 | S | S4.MboJ279ORF3710P (100% identity) | S4.MboJ6ORF1160P | |
| ??? | S | S4.MboRM16ORF1000P (30% identity) | S5.MboJ6ORF1160P | |
| 1205 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1835 | DNA polymerase III subunit delta | |||
| 1840 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboJ6ORF1840P |
| 1845 | R | MboRM16ORF1695P (100% identity) | CTAG | MboJ6ORF1840P |
| 1850 | 53 aa hypothetical protein | |||
| 2560 | 150 aa hypothetical protein | |||
| 2565 | M | M.MboVK16ORF2235P (100% identity) | M.MboJ6ORF2565P | |
| 2570 | R | MboVK16ORF2235P (100% identity) | MboJ6ORF2565P | |
| 2575 | excinuclease ABC subunit UvrB | |||
| 2970 | 30S ribosomal protein S2 | |||
| 2975 | M | M.MboRM16ORF3600P (100% identity) | M.MboJ6ORF2975P | |
| 2980 | variable surface lipoprotein | |||
| 3445 | 62 aa hypothetical protein | |||
| 3450 | M | M.MbosMb1ORF2980P (100% identity) | M.MboJ6ORF3450P | |
| 3455 | ribonuclease HIII | |||
| 3740 | AAA family ATPase | |||
| 3745 | R | R1.MbosMb1ORF3285P (100% identity) | R1.MboJ6ORF3760P | |
| 3750 | IS3 family transposase | |||
| 3755 | R | Mfbo651ORFDP (49% identity) | GCATC | R2.MboJ6ORF3760P |
| 3760 | M | M2.MboRM16ORF2835P (100% identity) | GCATC | M1.MboJ6ORF3760P |
| 3765 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboJ6ORF3760P |
| 3770 | 30S ribosomal protein S16 | |||
| 3850 | 78 aa hypothetical protein | |||
| 3855 | M | M.MboRM16ORF2735P (100% identity) | M.MboJ6ORF3855P | |
| 3860 | 98 aa hypothetical protein | |||
| 4000 | 76 aa hypothetical protein | |||
| 4005 | M | M.MboVK16ORF3575P (100% identity) | GANTC | M.MboJ6ORF4005P |
| 4010 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 930 | 150 aa hypothetical protein | |||
| 935 | R | MbosMb1ORF815P (100% identity) | MboJ6ORF940P | |
| 940 | M | M1.Mbo2009ORF835P (99% identity) | M1.MboJ6ORF940P | |
| 945 | M | M2.MboJ279ORF830P (99% identity) | M2.MboJ6ORF940P | |
| 950 | M | M3.MboNX114ORF860P (97% identity) | M3.MboJ6ORF940P | |
| 955 | trigger factor | |||