Mycoplasmopsis bovis J137 |
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Putative Mycoplasmopsis bovis J137 RM systems
Ref: Garcia-Galan,A. et al. bioRxiv (2021)
REBASE ref # 33616
Complete sequence: 1,088,615 bp
GenBank #: CP068732
REBASE acronym: MboJ137
Org_num: 54721
All begin JNG58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3515 | IS3 family transposase | |||
| 3520 | S | S4.MboRM16ORF1000P (30% identity) | S6.MboJ137ORF3565P | |
| 3525 | S | S1.MboMJ4ORF3415P (38% identity) | S5.MboJ137ORF3565P | |
| 3530 | S | S.Mbos175ORF5445EP (100% identity) | S4.MboJ137ORF3565P | |
| 3535 | ATP-binding protein | |||
| 3540 | S | S2.MboJ6ORF1160P (100% identity) | S3.MboJ137ORF3565P | |
| 3545 | site-specific integrase | |||
| 3550 | R | MbosMb1ORF1005P (100% identity) | MboJ137ORF3565P | |
| 3555 | S | S1.MbosMb1ORF1005P (50% identity) | S2.MboJ137ORF3565P | |
| 3560 | S | S1.MboC81ORF3325P (100% identity) | S1.MboJ137ORF3565P | |
| 3565 | M | M.MbosMb1ORF1005P (100% identity) | M.MboJ137ORF3565P | |
| 3570 | 246 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1100 | 30S ribosomal protein S2 | |||
| 1105 | M | M.MboXBY01ORFBP (100% identity) | GATC | M.MboJ137ORF1105P |
| 1110 | variable surface lipoprotein | |||
| 1615 | 92 aa hypothetical protein | |||
| 1620 | M | M.Mbos184ORF3155P (100% identity) | RCATGY | M.MboJ137ORF1620P |
| 1625 | ribonuclease HIII | |||
| 1825 | HNH endonuclease | |||
| ??? | M | M.MboT10ORFGP (100% identity) | M.MboJ137ORF1830P | |
| 1840 | 0 aa hypothetical protein | |||
| 2100 | excinuclease ABC subunit UvrB | |||
| 2105 | M | M.MbosMb1ORF2105P (100% identity) | GCNGC | M.MboJ137ORF2105P |
| 2110 | 150 aa hypothetical protein | |||
| 2875 | 52 aa hypothetical protein | |||
| 2880 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboJ137ORF2885P |
| 2885 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboJ137ORF2885P |
| 2890 | DNA polymerase III subunit delta | |||
| 3855 | AAA family ATPase | |||
| 3860 | R | R1.MbosMb1ORF3285P (100% identity) | R1.MboJ137ORF3875P | |
| 3865 | IS3 family transposase | |||
| 3870 | R | Mfbo651ORFDP (49% identity) | GCATC | R2.MboJ137ORF3875P |
| 3875 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M1.MboJ137ORF3875P |
| 3880 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboJ137ORF3875P |
| 3885 | 30S ribosomal protein S16 | |||
| 4100 | YigZ family protein | |||
| 4110 | R | MbosMb1ORF3525P (100% identity) | GANTC | R2.MboJ137ORF4115P |
| 4115 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.MboJ137ORF4115P |
| 4120 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | trigger factor | |||
| 1785 | M | M3.MboC83ORF810P (99% identity) | M1.MboJ137ORF1785P | |
| 1790 | M | M2.MboVK6ORF790P (100% identity) | M2.MboJ137ORF1785P | |
| 1795 | M | M1.MboT10ORFEP (100% identity) | M3.MboJ137ORF1785P | |
| 1800 | R | MboXBY01ORFMP (100% identity) | MboJ137ORF1785P | |
| 1805 | 150 aa hypothetical protein | |||
| 3990 | Fic family protein | |||
| ??? | M | M.Mbo304ORF4085P (100% identity) | M1.MboJ137ORF3995P | |
| 4005 | M | M2.MbosMb1ORF3410P (51% identity) | M2.MboJ137ORF3995P | |
| 4010 | IS3 family transposase | |||