Mycoplasmopsis bovis J279 |
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Putative Mycoplasmopsis bovis J279 RM systems
Ref: Garcia-Galan,A. et al. bioRxiv (2021)
REBASE ref # 33616
Complete sequence: 1,113,982 bp
GenBank #: CP068730
REBASE acronym: MboJ279
Org_num: 54723
All begin JNG59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3665 | IS3 family transposase | |||
| 3670 | S | S3.MbosMb1ORF1005P (24% identity) | S5.MboJ279ORF3710P | |
| 3675 | S | S4.MboJ6ORF1160P (100% identity) | S4.MboJ279ORF3710P | |
| 3680 | S | S3.MboJ6ORF1160P (100% identity) | S3.MboJ279ORF3710P | |
| 3685 | ATP-binding protein | |||
| 3690 | S | S2.MbosMb1ORF1005P (100% identity) | S2.MboJ279ORF3710P | |
| 3695 | site-specific integrase | |||
| 3700 | R | MbosMb1ORF1005P (100% identity) | MboJ279ORF3710P | |
| 3705 | S | S1.MboJ228ORF3715P (100% identity) | S1.MboJ279ORF3710P | |
| 3710 | M | M.MbosMb1ORF1005P (100% identity) | M.MboJ279ORF3710P | |
| 3715 | 246 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1115 | 92 aa hypothetical protein | |||
| 1120 | M | M.Mbos184ORF3155P (100% identity) | RCATGY | M.MboJ279ORF1120P |
| 1125 | ribonuclease HIII | |||
| 1620 | variable surface lipoprotein | |||
| 1625 | M | M.MboXBY01ORFBP (100% identity) | GATC | M.MboJ279ORF1625P |
| 1630 | 30S ribosomal protein S2 | |||
| 2295 | excinuclease ABC subunit UvrB | |||
| 2300 | M | M.MbosMb1ORF2105P (100% identity) | GCNGC | M.MboJ279ORF2300P |
| 2305 | 150 aa hypothetical protein | |||
| 3040 | DUF285 domain-containing protein | |||
| 3045 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboJ279ORF3050P |
| 3050 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboJ279ORF3050P |
| 3055 | DNA polymerase III subunit delta | |||
| 3970 | AAA family ATPase | |||
| 3975 | R | R1.MboJ228ORF3995P (100% identity) | R1.MboJ279ORF3990P | |
| 3980 | IS3 family transposase | |||
| 3985 | R | Mfbo651ORFDP (49% identity) | GCATC | R2.MboJ279ORF3990P |
| 3990 | M | M2.MboRM16ORF2835P (100% identity) | GCATC | M1.MboJ279ORF3990P |
| 3995 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboJ279ORF3990P |
| 4000 | 30S ribosomal protein S16 | |||
| 4080 | 78 aa hypothetical protein | |||
| 4085 | M | M.MboRM16ORF2735P (100% identity) | M.MboJ279ORF4085P | |
| 4090 | 98 aa hypothetical protein | |||
| 4245 | IS30-like element ISMbov1 family transposase | |||
| 4250 | R | MboJ228ORF4250P (100% identity) | GANTC | MboJ279ORF4255P |
| 4255 | M | M.MboJ228ORF4250P (100% identity) | GANTC | M.MboJ279ORF4255P |
| 4260 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 820 | 150 aa hypothetical protein | |||
| 825 | R | MboXBY01ORFMP (100% identity) | MboJ279ORF830P | |
| 830 | M | M.MboXBY01ORFMP (99% identity) | M1.MboJ279ORF830P | |
| 835 | M | M2.MboJ6ORF940P (99% identity) | M2.MboJ279ORF830P | |
| 840 | M | M3.MboJ228ORF830P (100% identity) | M3.MboJ279ORF830P | |
| 845 | trigger factor | |||
| 4135 | Fic family protein | |||
| ??? | M | M.MboC72ORF3695P (100% identity) | M.MboJ279ORF4140P | |
| 4150 | IS3 family transposase | |||