Methanospirillum hungatei JF-1 |
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Putative Methanospirillum hungatei JF-1 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 21250
Complete sequence: 3,544,738 bp
GenBank #: CP000254 (NC_007796)
REBASE acronym: Mhu
Org_num: 4278
All begin Mhun_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1663 | PilT protein-like protein | |||
| 1664 | R | type I site-specific deoxyribonuclease | MhuORF1665P | |
| 1665 | M | M.Msp273V (94% identity) | M.MhuORF1665P | |
| 1666 | 165 aa conserved hypothetical protein | |||
| 1667 | 256 aa conserved hypothetical protein | |||
| 1668 | 79 aa hypothetical protein | |||
| ??? | S | 101 aa hypothetical protein | S.MhuORF1665P | |
| 1670 | transposase, putative | |||
| 1908 | transposase, IS4 family | |||
| 1909 | M | 147 aa hypothetical protein | M.MhuORF1909AP | |
| 1910 | transcriptional regulator, AbrB family | |||
| 1911 | PilT protein-like protein | |||
| 1912 | M | Type I RM system M subunit | M.MhuORF1909BP | |
| 1913 | 68 aa hypothetical protein | |||
| 2780 | 539 aa conserved hypothetical protein | |||
| 2781 | R | Msp273IVP (95% identity) | MhuORF2789P | |
| 2782 | transcriptional regulator | |||
| ??? | S | S.CspNS01ORF1171P (27% identity) | S.MhuORF2789AP | |
| 2784 | RNA-directed DNA polymerase | |||
| 2785 | S | S.NspKA1ORF9190P (12% identity) | S.MhuORF2789BP | |
| 2786 | 237 aa conserved hypothetical protein | |||
| 2787 | protein of unknown function DUF1016 | |||
| 2788 | protein of unknown function DUF1016 | |||
| 2789 | M | M.MhuGP1ORF13065P (95% identity) | M.MhuORF2789P | |
| 2790 | protein of unknown function DUF55 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 882 | Na+/solute symporter | |||
| 884 | M | M.MhuGP1ORF1015P (64% identity) | CTNAG | M.MhuI |
| 885 | PAS/PAC sensor signal transduction histidine | |||
| 1080 | 369 aa conserved hypothetical protein | |||
| 1081 | RM | DbaSRB2ORF2050P (47% identity) | MhuORF1081P | |
| 1082 | 88 aa conserved hypothetical protein | |||
| 1752 | 187 aa hypothetical protein | |||
| 1753 | M | M.Dsa8305ORF100P (44% identity) | M.MhuORF1753P | |
| 1754 | 405 aa conserved hypothetical protein | |||
| 1894 | 1178 aa conserved hypothetical protein | |||
| 1895 | RM | Mli2279ORF1544P (62% identity) | MhuORF1895AP | |
| 1896 | pseudogene | |||
| 1897 | 255 aa hypothetical protein | |||
| 1898 | 177 aa hypothetical protein | |||
| 1899 | 128 aa hypothetical protein | |||
| 1900 | transcriptional regulator | |||
| 1901 | 92 aa hypothetical protein | |||
| 1902 | 201 aa hypothetical protein | |||
| 1903 | 138 aa conserved hypothetical protein | |||
| 1904 | RM | type IIS restriction endonuclease | MhuORF1895BP | |
| 1905 | 873 aa conserved hypothetical protein | |||
| 1944 | peptidase S8 and S53, subtilisin, kexin, | |||
| 1945 | M | M.Msp273I (75% identity) | GATC | M.MhuIII |
| 1946 | anion transporter | |||
| 2536 | peptidase M50 | |||
| 2537 | M | M.Mor3596ORF2785P (54% identity) | CCCGGG | M.MhuORF2537P |
| 2538 | R | 150 aa hypothetical protein | CCCGGG | MhuORF2537P |
| 2539 | transposase, IS4 family | |||
| 2936 | signal transduction protein with CBS | |||
| 2937 | M | M.MhuGP1ORF8305P (91% identity) | M.MhuIV | |
| 2938 | PRC-barrel | |||
| 3050 | 423 aa conserved hypothetical protein | |||
| 3051 | M | M.Msp273II (75% identity) | GTAC | M.MhuII |
| 3052 | thiol-driven fumarate reductase, iron-sulfur | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 476 | methyltransferase | |||
| 477 | R | MhuGP1MrrP (90% identity) | MhuMrrP | |
| 478 | transposase, IS4 family | |||
| 1297 | pseudogene | |||
| 1298 | R | Mso21McrBP (18% identity) | MhuMcrBP | |
| 1299 | R | Maq9704McrCP (27% identity) | MhuMcrCP | |
| 1300 | endoribonuclease L-PSP | |||