Escherichia coli O78 3 |
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Putative Escherichia coli O78 3 RM systems
Ref: Guo,Z. unpublished
REBASE ref # 33397
Complete sequence: 5,211,633 bp
GenBank #: CP084096
REBASE acronym: EcoO783
Org_num: 53859
All begin LCF29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4690 | DNA-binding protein | |||
| 4695 | M | M.Ecos641ORF18845P (100% identity) | M.EcoO783ORF4695P | |
| 4700 | S | S.EcoWH398ORF26840P (100% identity) | S.EcoO783ORF4695P | |
| 4705 | R | EcoW087ORF4400P (100% identity) | EcoO783ORF4695P | |
| 4710 | lactate utilization protein C | |||
| 5735 | endoribonuclease SymE | |||
| 5740 | R | EcoSCU316ORF2545P (100% identity) | EcoO783ORF5750P | |
| 5745 | S | S.EcoSCU316ORF2545P (100% identity) | S.EcoO783ORF5750P | |
| 5750 | M | M.EcoSCU316ORF2545P (100% identity) | M.EcoO783ORF5750P | |
| 5755 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2235 | cell division protein DamX | |||
| 2240 | M | M.EcoSCU316DamP (100% identity) | GATC | M.EcoO783DamP |
| 2245 | ribulose-phosphate 3-epimerase | |||
| 2750 | DUF2556 family protein | |||
| 2755 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.EcoO783ORF2755P |
| 2760 | DNA-binding transcriptional regulator Fis | |||
| 9960 | recombination protein NinB | |||
| 9965 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoO783ORF9965P |
| 9970 | NinE family protein | |||
| 12780 | TrmB family transcriptional regulator | |||
| 12785 | M | M.SboBSORF1444P (99% identity) | A | M.EcoO783ORF12785P |
| 12805 | 39 aa hypothetical protein | |||
| 16640 | drug/metabolite exporter YedA | |||
| 16645 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoO783DcmP |
| 16650 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoO783DcmP |
| 16655 | phosphohydrolase | |||
| 23760 | phage portal protein | |||
| 23765 | R | Eco1290ORF18880P (100% identity) | EcoO783ORF23770P | |
| 23770 | M | M.EcoF95ORF30P (100% identity) | M.EcoO783ORF23770P | |
| 23775 | DUF3850 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 600 | zinc-ribbon domain-containing protein | |||
| 605 | R | Kpn0718McrBP (100% identity) | EcoO783McrBP | |
| 610 | R | SflN97McrCP (100% identity) | EcoO783McrCP | |
| 615 | IS3-like element ISSen4 family transposase | |||