Escherichia coli NDM1 |
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Putative Escherichia coli NDM1 RM systems
Ref: Simner,P. et al. unpublished
REBASE ref # 33390
| Sequence length: | GenBank #: | |
| Chromosome: | 4,840,195 bp | CP083888 |
| plasmid unnamed2: | 137,647 bp | CP083890 |
| plasmid unnamed5: | 11,489 bp | CP083893 |
| plasmid unnamed6: | 9,459 bp | CP083894 |
REBASE acronym: EcoNDM1
Org_num: 12944
All begin LCE25_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1665 | cell division protein DamX | |||
| 1670 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNDM1DamP |
| 1675 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoNDM1ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9265 | phosphohydrolase | |||
| 9270 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNDM1DcmP |
| 9275 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoNDM1DcmP |
| 9280 | drug/metabolite exporter YedA | |||
| 21360 | phage holin, lambda family | |||
| 21365 | M | M.SflLIN17ORF17405P (99% identity) | M.EcoNDM1ORF21365P | |
| 21370 | 67 aa hypothetical protein | |||
| 21400 | LexA family transcriptional regulator | |||
| 21405 | M | M.EcoS133I (100% identity) | GATC | M.EcoNDM1ORF21405P |
| 21410 | PerC family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 24805 | 73 aa hypothetical protein | |||
| 24810 | M | M.StyR64ORFAP (100% identity) | M.EcoNDM1ORF24810P | |
| 24815 | 103 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 25385 | MbeD family mobilization/exclusion protein | |||
| 25390 | R | EcoSCU484ORF25120P (100% identity) | GATATC | EcoNDM1ORF25400P |
| 25395 | C | C.EcoC9120IIP (92% identity) | C.EcoNDM1ORF25400P | |
| 25400 | M | M.EcoSCU484ORF25120P (100% identity) | GATATC | M.EcoNDM1ORF25400P |
| 25405 | Rop family plasmid primer RNA-binding protein | |||
| plasmid unnamed6 | ||||
| 25445 | MbeD family mobilization/exclusion protein | |||
| 25450 | R | SenpCI (100% identity) | CCGCGG | EcoNDM1ORF25455P |
| 25455 | M | M.EcoLH99cORF23920P (100% identity) | CCGCGG | M.EcoNDM1ORF25455P |
| 25460 | Rop family plasmid primer RNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13495 | NADP-dependent isocitrate dehydrogenase | |||
| 13500 | R | EcosEC27McrCP (100% identity) | EcoNDM1McrCP | |
| 13505 | R | EmaE2C08McrBP (100% identity) | EcoNDM1McrBP | |
| 13510 | tail fiber assembly protein | |||