Salmonella species A29-2 |
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Putative Salmonella species A29-2 RM systems
Ref: Liu,Z. and Li,R. unpublished
REBASE ref # 32765
Complete sequence: 4,885,263 bp
GenBank #: CP083731
REBASE acronym: SspA292
Org_num: 55375
All begin K8W53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20030 | 322 aa hypothetical protein | |||
| 20035 | R | SenUA39ORF963P (100% identity) | GAYANNNNNNNNGTGG | SspA292ORF20040P |
| 20040 | M | M.SenUA39ORF963P (100% identity) | GAYANNNNNNNNGTGG | M.SspA292ORF20040P |
| 20045 | S | S.SenUA39ORF963P (100% identity) | GAYANNNNNNNNGTGG | S.SspA292ORF20040P |
| 20050 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.SspA292Dam2P |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.SspA292DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.SspA292ORF2275P |
| 2280 | tyrosine-type recombinase/integrase | |||
| 7005 | NinE family protein | |||
| 7010 | M | M.SenTY27ORF7350P (100% identity) | M.SspA292ORF7010P | |
| 7015 | protein ninF | |||
| 9325 | phosphohydrolase | |||
| 9330 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SspA292Dcm2P |
| 9335 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SspA292Dcm2P |
| 9340 | drug/metabolite exporter YedA | |||
| 9325 | phosphohydrolase | |||
| 9330 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SspA292DcmP |
| 9335 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SspA292DcmP |
| 9340 | drug/metabolite exporter YedA | |||
| 20180 | YebC/PmpR family DNA-binding transcriptional | |||
| 20185 | R | SenTY27ORF20805P (96% identity) | SspA292ORF20185P | |
| 20190 | malate transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17200 | small effector SsaA | |||
| 17205 | R | SenXB08ORF17480P (100% identity) | CAGAG | SspA292ORF17210P |
| 17210 | M | M.SenUA39ORF715P (100% identity) | CAGAG | M.SspA292ORF17210P |
| 17215 | MFS transporter | |||