Escherichia coli SUISSEKPC3NDM5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli SUISSEKPC3NDM5 RM systems
Ref: Sadek,M. unpublished
REBASE ref # 30421
| Sequence length: | GenBank #: | |
| Chromosome: | 5,036,231 bp | CP083701 |
| plasmid p1606A: | 120,731 bp | CP083702 |
| plasmid p1606c: | 58,698 bp | CP083704 |
| plasmid p1606d: | 146,558 bp | CP083705 |
| plasmid p1606e: | 89,634 bp | CP083706 |
| plasmid p1606f: | 107,032 bp | CP083707 |
REBASE acronym: Eco3NDM5
Org_num: 53931
All begin K9O95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12855 | GTPase family protein | |||
| 12860 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | M.Eco3NDM5ORF12860P |
| 12865 | S | S.Sfl877II (100% identity) | AAAYNNNNNNCTC | S.Eco3NDM5ORF12860P |
| 12870 | R | Sfl877IIP (100% identity) | AAAYNNNNNNCTC | Eco3NDM5ORF12860P |
| 12875 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 775 | recombination protein NinB | |||
| 780 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco3NDM5ORF780P |
| 785 | phosphoadenosine phosphosulfate reductase family | |||
| 2870 | phosphohydrolase | |||
| 2875 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco3NDM5DcmP |
| 2880 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco3NDM5DcmP |
| 2885 | drug/metabolite exporter YedA | |||
| 3310 | 73 aa hypothetical protein | |||
| 3315 | M | M.EcoNEC9ORF9720P (100% identity) | M.Eco3NDM5ORF3315P | |
| 3320 | YqaJ viral recombinase family protein | |||
| 12505 | 321 aa hypothetical protein | |||
| 12510 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco3NDM5ORF12515P |
| 12515 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco3NDM5ORF12515P |
| 12520 | 257 aa hypothetical protein | |||
| 20345 | DUF2556 family protein | |||
| 20350 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco3NDM5ORF20350P |
| 20355 | tyrosine-type recombinase/integrase | |||
| plasmid p1606A | ||||
| 25150 | 73 aa hypothetical protein | |||
| 25155 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco3NDM5ORF25155P | |
| 25160 | 103 aa hypothetical protein | |||
| plasmid p1606c | ||||
| 25755 | 73 aa hypothetical protein | |||
| 25760 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco3NDM5ORF25760P | |
| 25765 | 103 aa hypothetical protein | |||
| plasmid p1606d | ||||
| 26320 | 97 aa hypothetical protein | |||
| 26325 | M | M.Xca80ORFEP (100% identity) | M.Eco3NDM5ORF26325P | |
| 26330 | 73 aa hypothetical protein | |||
| plasmid p1606e | ||||
| 26970 | recombination-associated protein RdgC | |||
| 26975 | M | M.EcoUKDORF25705P (99% identity) | M.Eco3NDM5ORF26975P | |
| 26990 | TerB family tellurite resistance protein | |||
| plasmid p1606f | ||||
| 27945 | 103 aa hypothetical protein | |||
| 27950 | M | M.SspPIBORF23080P (100% identity) | M.Eco3NDM5ORF27950P | |
| 27955 | 73 aa hypothetical protein | |||