Clostridium perfringens C216 |
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Putative Clostridium perfringens C216 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,148,944 bp | CP075973 |
| plasmid pCPC216_1: | 71,757 bp | CP075974 |
REBASE acronym: CpeC216
Org_num: 53209
All begin KLF50_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7265 | helix-turn-helix domain-containing protein | |||
| 7270 | R | Cpe77bORF7430P (100% identity) | CCWGG | CpeC216ORF7275P |
| 7275 | M | M.Cpe77bORF7430P (100% identity) | CCWGG | M.CpeC216ORF7275P |
| 7280 | IS200/IS605 family transposase | |||
| 12210 | XRE family transcriptional regulator | |||
| 12215 | M | M2.Cpe73ORF14840P (100% identity) | M1.CpeC216ORF12215P | |
| 12220 | M | M1.Cpe73ORF14840P (100% identity) | M2.CpeC216ORF12215P | |
| 12225 | McrC family protein | |||
| 13830 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 13835 | M | M.Cpe77bORF13955P (100% identity) | GTATAC | M.CpeC216ORF13835P |
| 13840 | YhgE/Pip domain-containing protein | |||
| plasmid pCPC216_1 | ||||
| 14560 | TcpJ | |||
| 14565 | M | M.CpeF4969ORFBP (100% identity) | M.CpeC216ORF14565P | |
| 14570 | 57 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1960 | DUF4391 domain-containing protein | |||
| 1965 | M | M.Cpe77bORF2080P (100% identity) | M.CpeC216ORF1965P | |
| 1970 | R | Cpe77bORF2080P (100% identity) | CpeC216ORF1965P | |
| 1975 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4580 | 103 aa hypothetical protein | |||
| 4585 | R | Csp1R1McrBP (100% identity) | CpeC216McrB2P | |
| 4590 | R | Cpe77bMcrCP (100% identity) | CpeC216McrC2P | |
| 4595 | SdpI family protein | |||
| 4625 | CPBP family intramembrane metalloprotease | |||
| 4630 | R | Cpe57K1McrB3P (100% identity) | CpeC216McrB3P | |
| 4635 | R | Cpe77bMcrC2P (100% identity) | CpeC216McrC3P | |
| 4640 | amidohydrolase | |||
| 4685 | ribosomal protein L7/L12 | |||
| 4690 | R | Cpe77bORF4725P (100% identity) | CpeC216ORF4690P | |
| 4695 | 49 aa hypothetical protein | |||
| 12220 | site-specific DNA-methyltransferase | |||
| 12225 | R | Cpe73McrCP (100% identity) | CpeC216McrCP | |
| 12230 | R | Cpe73McrBP (100% identity) | CpeC216McrBP | |
| 12235 | 263 aa hypothetical protein | |||