Clostridium perfringens C269 |
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Putative Clostridium perfringens C269 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,208,157 bp | CP075970 |
| plasmid pCPC269_1: | 70,475 bp | CP075971 |
REBASE acronym: CpeC269
Org_num: 53210
All begin KLF29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 905 | winged helix-turn-helix transcriptional | |||
| 910 | M | M.LsaZLp4bORFDP (46% identity) | M.CpeC269ORF910P | |
| 915 | S | S2.Msp654ORF17385P (40% identity) | S.CpeC269ORF910P | |
| 920 | 112 aa hypothetical protein | |||
| 4880 | NERD domain-containing protein | |||
| 4885 | M | M.Cpe0050ORF5430P (87% identity) | M.CpeC269ORF4885P | |
| 4890 | TIGR04141 family sporadically distributed | |||
| 4890 | TIGR04141 family sporadically distributed | |||
| 4895 | R | Cpe8449IP (98% identity) | CpeC269ORF4900P | |
| 4900 | M | M.CpeA17ORF5335P (99% identity) | M.CpeC269ORF4900P | |
| 4905 | S | S.CpeHS7ORF4560P (66% identity) | S.CpeC269ORF4900P | |
| 4910 | 793 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7035 | SH3 domain-containing protein | |||
| 7040 | M | M.Cpe8346DndBP (100% identity) | M.CpeC269DndBP | |
| 7045 | DNA phosphorothioation system sulfurtransferase | |||
| 7040 | DNA sulfur modification protein DndB | |||
| 7045 | M | M.Cpe8346DndCP (99% identity) | M.CpeC269DndCP | |
| 7050 | DNA sulfur modification protein DndD | |||
| 7045 | DNA phosphorothioation system sulfurtransferase | |||
| 7050 | M | M.Cpe211DndDP (98% identity) | M.CpeC269DndDP | |
| 7055 | DndE family protein | |||
| 7050 | DNA sulfur modification protein DndD | |||
| 7055 | M | M.CpeN11DndEP (99% identity) | M.CpeC269DndEP | |
| 7060 | cysteine desulfurase | |||
| 7055 | DndE family protein | |||
| 7060 | M | M.Cpe932DndAP (96% identity) | M.CpeC269DndAP | |
| 7065 | 227 aa hypothetical protein | |||
| 7070 | 262 aa hypothetical protein | |||
| 7075 | R | CpeN11DptHP (98% identity) | CpeC269DptHP | |
| 7080 | DNA phosphorothioation-dependent restriction | |||
| 7075 | DNA phosphorothioation-dependent restriction | |||
| 7080 | R | Cpe8346DptGP (100% identity) | CpeC269DptGP | |
| 7085 | DNA phosphorothioation-dependent restriction | |||
| 7080 | DNA phosphorothioation-dependent restriction | |||
| 7085 | R | CpeN11DptFP (98% identity) | CpeC269DptFP | |
| 7090 | 308 aa hypothetical protein | |||
| 14050 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14055 | M | M.CpeS10ORF14490P (100% identity) | GTATAC | M.CpeC269ORF14055P |
| 14060 | YhgE/Pip domain-containing protein | |||
| plasmid pCPC269_1 | ||||
| 14655 | TcpJ | |||
| 14660 | M | M.CpeF4969ORFBP (100% identity) | M.CpeC269ORF14660P | |
| 14665 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4730 | 103 aa hypothetical protein | |||
| 4735 | R | CpeS1McrBP (98% identity) | CpeC269McrBP | |
| 4740 | R | Cpe70McrCP (96% identity) | CpeC269McrCP | |
| 4745 | SdpI family protein | |||
| 4850 | 178 aa hypothetical protein | |||
| 4855 | R | Cpe80ORF5020P (97% identity) | CpeC269ORF4855P | |
| 4860 | ATP-dependent helicase | |||