Clostridium perfringens CPI 39-1a |
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Putative Clostridium perfringens CPI 39-1a RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,137,875 bp | CP075941 |
| plasmid pCPCPI39-1_1: | 71,757 bp | CP075942 |
| plasmid pCPCPI39-1_2: | 40,699 bp | CP075943 |
REBASE acronym: Cpe391a
Org_num: 53217
All begin KLF42_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7190 | helix-turn-helix domain-containing protein | |||
| 7195 | R | CpeC216ORF7275P (100% identity) | CCWGG | Cpe391aORF7200P |
| 7200 | M | M.CpeC216ORF7275P (100% identity) | CCWGG | M.Cpe391aORF7200P |
| 7205 | IS200/IS605 family transposase | |||
| 12135 | XRE family transcriptional regulator | |||
| 12140 | M | M1.CpeC216ORF12215P (100% identity) | M1.Cpe391aORF12140P | |
| 12145 | M | M2.CpeC216ORF12215P (100% identity) | M2.Cpe391aORF12140P | |
| 12150 | McrC family protein | |||
| 13755 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 13760 | M | M.CpeC216ORF13835P (100% identity) | GTATAC | M.Cpe391aORF13760P |
| 13765 | YhgE/Pip domain-containing protein | |||
| plasmid pCPCPI39-1_1 | ||||
| 14410 | TcpJ | |||
| 14415 | M | M.CpeF4969ORFBP (100% identity) | M.Cpe391aORF14415P | |
| 14420 | 57 aa hypothetical protein | |||
| plasmid pCPCPI39-1_2 | ||||
| 14670 | cobalt ABC transporter permease | |||
| 14675 | M | M.Cpe31ORF16300P (99% identity) | M.Cpe391aORF14675P | |
| 14680 | SH3 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1950 | DUF4391 domain-containing protein | |||
| 1955 | M | M.CpeC216ORF1965P (100% identity) | M.Cpe391aORF1955P | |
| 1960 | R | CpeC216ORF1965P (100% identity) | Cpe391aORF1955P | |
| 1965 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4505 | 103 aa hypothetical protein | |||
| 4510 | R | Csp1R1McrBP (100% identity) | Cpe391aMcrB2P | |
| 4515 | R | CpeC216McrC2P (100% identity) | Cpe391aMcrC2P | |
| 4520 | SdpI family protein | |||
| 4550 | CPBP family intramembrane metalloprotease | |||
| 4555 | R | CpeC216McrB3P (100% identity) | Cpe391aMcrB3P | |
| 4560 | R | CpeC216McrC3P (100% identity) | Cpe391aMcrC3P | |
| 4565 | amidohydrolase | |||
| 4610 | ribosomal protein L7/L12 | |||
| 4615 | R | CpeC216ORF4690P (100% identity) | Cpe391aORF4615P | |
| 4620 | 49 aa hypothetical protein | |||
| 12145 | site-specific DNA-methyltransferase | |||
| 12150 | R | CpeC216McrCP (100% identity) | Cpe391aMcrCP | |
| 12155 | R | CpeC216McrBP (100% identity) | Cpe391aMcrBP | |
| 12160 | 263 aa hypothetical protein | |||