Clostridium perfringens CPI 53k-r1 |
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Putative Clostridium perfringens CPI 53k-r1 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,274,194 bp | CP075934 |
| plasmid pCPCPI53k-r1_1: | 129,891 bp | CP075935 |
| plasmid pCPCPI53k-r1_2: | 70,011 bp | CP075936 |
| plasmid pCPCPI53k-r1_3: | 48,590 bp | CP075937 |
REBASE acronym: Cpe53kr1
Org_num: 53218
All begin KLF52_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4835 | 166 aa hypothetical protein | |||
| 4840 | M | M.Cpe905ORF9955P (100% identity) | M.Cpe53kr1ORF4840P | |
| 4845 | 332 aa hypothetical protein | |||
| 5045 | 358 aa hypothetical protein | |||
| 5050 | M | M1.Cpe88ORF5070P (85% identity) | M.Cpe53kr1ORF5050P | |
| 5055 | DNA cytosine methyltransferase | |||
| 5050 | DNA cytosine methyltransferase | |||
| 5055 | M | M2.Cpe88ORF5070P (100% identity) | M.Cpe53kr1ORF5055P | |
| ??? | AAA family ATPase | |||
| 5055 | DNA cytosine methyltransferase | |||
| ??? | R | R1.Cpe21D5ORFFP (61% identity) | R1.Cpe53kr1ORF5060P | |
| 5065 | R | R2.Cpe21D5ORFFP (100% identity) | R2.Cpe53kr1ORF5060P | |
| 5070 | 136 aa hypothetical protein | |||
| 12335 | ParB N-terminal domain-containing protein | |||
| 12340 | R | MspMM2ORF8445P (63% identity) | Cpe53kr1ORF12340P | |
| 12345 | modification methylase | |||
| 12340 | HNH endonuclease | |||
| 12345 | M | M.Mca82ORF12445P (50% identity) | M.Cpe53kr1ORF12345P | |
| 12350 | pentapeptide repeat-containing protein | |||
| 14590 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14595 | M | M.Cpe31ORF14635P (100% identity) | GTATAC | M.Cpe53kr1ORF14595P |
| 14600 | YhgE/Pip domain-containing protein | |||
| plasmid pCPCPI53k-r1_1 | ||||
| 15000 | M | M.CpeQHY2ORF15520P (100% identity) | M.Cpe53kr1ORF15000P | |
| 15005 | 94 aa hypothetical protein | |||
| plasmid pCPCPI53k-r1_2 | ||||
| 15715 | 101 aa hypothetical protein | |||
| 15720 | M | M.CpeS10ORF15250P (100% identity) | M.Cpe53kr1ORF15720P | |
| 15725 | 57 aa hypothetical protein | |||
| 15995 | DUF4236 domain-containing protein | |||
| 16000 | M | M.CpeF5603ORFAP (100% identity) | M.Cpe53kr1ORF16000P | |
| 16005 | 94 aa hypothetical protein | |||
| plasmid pCPCPI53k-r1_3 | ||||
| 16110 | 57 aa hypothetical protein | |||
| 16115 | M | M.Cpe8ORF15315P (100% identity) | M.Cpe53kr1ORF16115P | |
| 16120 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4910 | 103 aa hypothetical protein | |||
| 4915 | R | CpeML2McrBP (100% identity) | Cpe53kr1McrB3P | |
| 4920 | R | CpeAMcrCP (95% identity) | Cpe53kr1McrC3P | |
| 4925 | SdpI family protein | |||
| 4945 | CPBP family intramembrane metalloprotease | |||
| 4950 | R | CpeS10McrBP (80% identity) | Cpe53kr1McrB2P | |
| 4955 | McrC family protein | |||
| 4950 | AAA family ATPase | |||
| 4955 | R | CpeS10McrCP (99% identity) | Cpe53kr1McrC2P | |
| 4960 | AAA family ATPase | |||
| 5035 | ribosomal protein L7/L12 | |||
| 5040 | R | Cpe2aMcrB3P (100% identity) | Cpe53kr1McrBP | |
| 5045 | R | Cpe21D5McrCP (98% identity) | Cpe53kr1McrCP | |
| 5050 | DNA cytosine methyltransferase | |||