Clostridium perfringens CPI 57K-1 |
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Putative Clostridium perfringens CPI 57K-1 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,149,559 bp | CP075932 |
| plasmid pCPCPI57K-1_1: | 40,700 bp | CP075931 |
| plasmid pCPCPI57K-1_3: | 71,757 bp | CP075933 |
REBASE acronym: Cpe57K1
Org_num: 53219
All begin KLF41_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7765 | helix-turn-helix domain-containing protein | |||
| 7770 | R | CpeC216ORF7275P (100% identity) | CCWGG | Cpe57K1ORF7775P |
| 7775 | M | M.CpeC216ORF7275P (100% identity) | CCWGG | M.Cpe57K1ORF7775P |
| 7780 | IS200/IS605 family transposase | |||
| 12705 | XRE family transcriptional regulator | |||
| 12710 | M | M1.CpeC216ORF12215P (100% identity) | M1.Cpe57K1ORF12710P | |
| 12715 | M | M2.CpeC216ORF12215P (100% identity) | M2.Cpe57K1ORF12710P | |
| 12720 | McrC family protein | |||
| 14325 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14330 | M | M.CpeC216ORF13835P (100% identity) | GTATAC | M.Cpe57K1ORF14330P |
| 14335 | YhgE/Pip domain-containing protein | |||
| plasmid pCPCPI57K-1_1 | ||||
| 510 | SH3 domain-containing protein | |||
| ??? | M | M.Cpe391aORF14675P (76% identity) | M.Cpe57K1ORF515P | |
| plasmid pCPCPI57K-1_3 | ||||
| 14945 | 57 aa hypothetical protein | |||
| 14950 | M | M.CpeF4969ORFBP (100% identity) | M.Cpe57K1ORF14950P | |
| 14955 | TcpJ | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2465 | DUF4391 domain-containing protein | |||
| 2470 | M | M.CpeC216ORF1965P (100% identity) | M.Cpe57K1ORF2470P | |
| 2475 | R | CpeC216ORF1965P (100% identity) | Cpe57K1ORF2470P | |
| 2480 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5080 | 103 aa hypothetical protein | |||
| 5085 | R | Csp1R1McrBP (100% identity) | Cpe57K1McrB2P | |
| 5090 | R | CpeC216McrC2P (100% identity) | Cpe57K1McrC2P | |
| 5095 | SdpI family protein | |||
| 5125 | CPBP family intramembrane metalloprotease | |||
| 5130 | R | CpeC216McrB3P (100% identity) | Cpe57K1McrB3P | |
| 5135 | R | CpeC216McrC3P (100% identity) | Cpe57K1McrC3P | |
| 5140 | amidohydrolase | |||
| 5185 | ribosomal protein L7/L12 | |||
| 5190 | R | CpeC216ORF4690P (100% identity) | Cpe57K1ORF5190P | |
| 5195 | 49 aa hypothetical protein | |||
| 12715 | site-specific DNA-methyltransferase | |||
| 12720 | R | CpeC216McrCP (100% identity) | Cpe57K1McrCP | |
| 12725 | R | CpeC216McrBP (100% identity) | Cpe57K1McrBP | |
| 12730 | 263 aa hypothetical protein | |||