Campylobacter upsaliensis Campylobacter upsaliensis 17-M197059 |
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Putative Campylobacter upsaliensis Campylobacter upsaliensis 17-M197059 RM systems
Ref: Astvaldsson,A. and Skarin,J. unpublished
REBASE ref # 33033
Complete sequence: 1,584,492 bp
GenBank #: OU701459
REBASE acronym: Cup197059
Org_num: 53144
All begin CU197059_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 318 | 16S rRNA -N)-methyltransferase RsmG | |||
| 319 | R | Cup6824ORF1355P (97% identity) | Cup197059ORF320P | |
| 320 | M | M.Cup6824ORF1355P (99% identity) | M.Cup197059ORF320P | |
| 321 | 90 aa hypothetical protein | |||
| 322 | type II toxin-antitoxin system RelE/ParE family | |||
| 323 | S | S.Cup736ORF3125P (75% identity) | S.Cup197059ORF320P | |
| 324 | argininosuccinate synthase | |||
| 1073 | UDP-N-acetylmuramate--L-alanine ligase | |||
| 1074 | R | Cup11541ORF1107P (92% identity) | Cup197059ORF1076P | |
| 1075 | S | S.Che9613ORF3135P (66% identity) | S.Cup197059ORF1076P | |
| 1076 | M | M.Cup6824ORF5020P (96% identity) | M.Cup197059ORF1076P | |
| 1078 | 190 aa hypothetical protein | |||
| 1381 | 138 aa hypothetical protein | |||
| 1382 | M | M.Hwi431ORF2185P (98% identity) | M.Cup197059ORF1382P | |
| 1383 | S | S1.Hwi431ORF2185P (67% identity) | S.Cup197059ORF1382P | |
| 1384 | 478 aa hypothetical protein | |||
| 1586 | Tol-Pal system protein TolB | |||
| 1587 | M | M.Cup736ORF1225P (99% identity) | M.Cup197059ORF1587P | |
| 1588 | R | Cup6824ORF7620P (98% identity) | Cup197059ORF1587P | |
| 1589 | S | S.Cup11541ORF1651P (53% identity) | S1.Cup197059ORF1587P | |
| 1590 | S | S2.Cup6824ORF7620P (97% identity) | S2.Cup197059ORF1587P | |
| 1591 | TonB C-terminal domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 385 | thioredoxin | |||
| 386 | R | Cup11840ORF393P (100% identity) | Cup197059ORF387P | |
| 387 | M | M.Cup11840ORF393P (100% identity) | M.Cup197059ORF387P | |
| 388 | Crp/Fnr family transcriptional regulator | |||
| 622 | succinyl-diaminopimelate desuccinylase | |||
| 623 | RM | Cup6824ORF2735P (98% identity) | Cup197059ORF623P | |
| 624 | sulfur carrier protein ThiS | |||
| 778 | 177 aa hypothetical protein | |||
| 779 | M | M.Cup11840VII (96% identity) | GATC | M.Cup197059ORF779P |
| 780 | Ppx/GppA family phosphatase | |||
| 812 | 204 aa hypothetical protein | |||
| 813 | RM | Cup6824ORF3545P (99% identity) | Cup197059ORF813P | |
| 814 | restriction endonuclease subunit S | |||
| 1038 | 471 aa hypothetical protein | |||
| 1039 | M | M.Cup11840VI (94% identity) | M.Cup197059ORF1039P | |
| 1040 | R | Cup736ORF6595P (100% identity) | Cup197059ORF1039P | |
| 1041 | prephenate dehydratase | |||
| 1140 | virion morphogenesis protein | |||
| 1141 | M | M.Cup11840ORF1157P (98% identity) | M.Cup197059ORF1141P | |
| 1142 | 95 aa hypothetical protein | |||
| 1145 | ATP-binding protein | |||
| 1146 | R | Cup11840ORF1164P (10% identity) | Cup197059ORF1147P | |
| 1147 | M | M.Csp6878ORF3435P (98% identity) | M.Cup197059ORF1147P | |
| 1148 | R.Pab1 family restriction endonuclease | |||
| 1147 | DNA cytosine methyltransferase | |||
| 1148 | M | M.Cup11840ORF1165P (99% identity) | M1.Cup197059ORF1148P | |
| 1149 | restriction endonuclease | |||
| 1150 | SAM-dependent methyltransferase | |||
| 1151 | M | M.Cup11840ORF1168P (100% identity) | M2.Cup197059ORF1148P | |
| 1152 | glutamine-hydrolyzing GMP synthase | |||
| 1148 | R.Pab1 family restriction endonuclease | |||
| 1149 | R | Cup11840ORF1166P (100% identity) | CTRYAG | Cup197059ORF1150P |
| 1150 | M | M.Cup11840IX (99% identity) | CTRYAG | M.Cup197059ORF1150P |
| 1151 | SAM-dependent methyltransferase | |||
| 1167 | ATP-binding cassette domain-containing protein | |||
| 1168 | M | M.Cup11840ORF1185P (100% identity) | M.Cup197059ORF1168P | |
| 1169 | DUF2726 domain-containing protein | |||
| 1281 | 2-amino-4-hydroxy-6- | |||
| 1282 | R | Cup6824ORF5895P (97% identity) | Cup197059ORF1283P | |
| 1283 | M | M.Cup11840ORF1316P (96% identity) | M.Cup197059ORF1283P | |
| 1284 | DNA polymerase I | |||
| 1312 | 202 aa hypothetical protein | |||
| 1313 | M | M.Cup11840ORF1346P (99% identity) | M.Cup197059ORF1313P | |
| 1314 | acetate--CoA ligase | |||
| 1478 | 4Fe-4S dicluster domain-containing protein | |||
| 1479 | R | Cup6824ORF7105P (99% identity) | Cup197059ORF1480P | |
| 1480 | M | M.Cup6824ORF7105P (97% identity) | M.Cup197059ORF1480P | |
| 1481 | ATP-binding cassette domain-containing protein | |||
| 1640 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 1641 | R | Cup6824ORF7890P (98% identity) | GGATG | Cup197059ORF1642P |
| 1642 | M | M1.Cup11840VIII (98% identity) | GGATG | M1.Cup197059ORF1642P |
| 1643 | M | M2.Cup6824ORF7890P (98% identity) | GGATG | M2.Cup197059ORF1642P |
| 1644 | DNA adenine methylase | |||
| 1643 | DNA adenine methylase | |||
| 1644 | M | M.Cup14913ORF1672P (98% identity) | RAATTY | M.Cup197059ORF1644P |
| 1645 | papain-like cysteine peptidase | |||
| 1653 | glutamate synthase large subunit | |||
| 1654 | M | M.Cup6824ORF7960P (99% identity) | M.Cup197059ORF1654P | |
| 1655 | 210 aa hypothetical protein | |||
| 1656 | R | Cup6824ORF7960P (100% identity) | Cup197059ORF1654P | |
| 1657 | glutamate synthase subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 69 | sodium:proton antiporter | |||
| 70 | R | Che9613ORF7220P (97% identity) | Cup197059ORF71P | |
| 71 | M | M.Cup736ORF1980P (95% identity) | M.Cup197059ORF71P | |
| 72 | SPASM domain-containing protein | |||
| 513 | 247 aa hypothetical protein | |||
| 514 | R | Cup736ORF4090P (97% identity) | Cup197059ORF515P | |
| 515 | M | M.Cup29ORFAP (98% identity) | M.Cup197059ORF515P | |
| 516 | lipid-A-disaccharide synthase | |||