Escherichia coli RP437 |
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Putative Escherichia coli RP437 RM systems
Ref: Ridone,P. and Baker,M.A.B. unpublished
REBASE ref # 33404
Complete sequence: 4,641,516 bp
GenBank #: CP083410
REBASE acronym: EcoRP437
Org_num: 53885
All begin LAJ62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22140 | endoribonuclease SymE | |||
| 22145 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoRP437ORF22150P |
| 22150 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoRP437ORF22150P |
| 22155 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoRP437ORF22150P |
| 22160 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16600 | DNA-binding transcriptional regulator Fis | |||
| 16605 | M | M.EcoRR1ORF16650P (100% identity) | ATGCAT | M.EcoRP437ORF16605P |
| 16610 | DUF2556 family protein | |||
| 17225 | ribulose-phosphate 3-epimerase | |||
| 17230 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoRP437DamP |
| 17235 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5880 | site-specific DNA recombinase | |||
| 5885 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoRP437ORF5885P |
| 5890 | NADP-dependent isocitrate dehydrogenase | |||
| 22125 | 978 aa hypothetical protein | |||
| 22130 | R | SenHNK130McrCP (100% identity) | EcoRP437McrCP | |
| 22135 | R | SenHNK130McrBP (100% identity) | EcoRP437McrBP | |
| 22140 | endoribonuclease SymE | |||
| 22155 | type I restriction-modification system | |||
| 22160 | R | SenHNK130MrrP (100% identity) | EcoRP437Mrr2P | |
| 22165 | GTPase | |||