Vibrio parahaemolyticus 20-082E4 |
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Putative Vibrio parahaemolyticus 20-082E4 RM systems
Ref: Jeon,H.J. et al. unpublished
REBASE ref # 33934
| Sequence length: | GenBank #: | |
| chromosome I: | 3,610,911 bp | CP083361 |
| chromosome II: | 1,802,310 bp | CP083362 |
| plasmid pVp-20-082E4B: | 67,089 bp | CP083364 |
REBASE acronym: Vpa82E4
Org_num: 56006
All begin K9N54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1865 | 331 aa hypothetical protein | |||
| 1870 | S | S.VpaSM4II (100% identity) | S.Vpa82E4ORF1875P | |
| 1875 | M | M.Vpa021D1ORF9280P (100% identity) | M.Vpa82E4ORF1875P | |
| 1880 | DUF6262 family protein | |||
| 1945 | 91 aa hypothetical protein | |||
| 1950 | M | M.VvuORF2031P (33% identity) | M.Vpa82E4ORF1950P | |
| 1955 | 132 aa hypothetical protein | |||
| 1960 | 49 aa hypothetical protein | |||
| 1965 | elongation factor Ts | |||
| 1970 | site-specific DNA-methyltransferase | |||
| 1975 | R | VphVPD14ORF14435P (100% identity) | Vpa82E4ORF1950P | |
| 1980 | MarR family transcriptional regulator | |||
| 3340 | DUF2787 domain-containing protein | |||
| 3345 | R | Vpa021D1ORF7705P (100% identity) | Vpa82E4ORF3360P | |
| 3350 | S | S.Vow605ORFFP (100% identity) | S.Vpa82E4ORF3360P | |
| 3355 | AAA family ATPase | |||
| 3360 | M | M.Vpa021D1ORF7705P (100% identity) | M.Vpa82E4ORF3360P | |
| 3365 | tyrosine-type recombinase/integrase | |||
| 16775 | 97 aa hypothetical protein | |||
| 16780 | R | Vpa021D1ORF11750P (100% identity) | Vpa82E4ORF16790P | |
| 16785 | S | S.Vpa021D1ORF11750P (100% identity) | S.Vpa82E4ORF16790P | |
| 16790 | M | M.Vpa021D1ORF11750P (100% identity) | M.Vpa82E4ORF16790P | |
| 16795 | DUF6262 family protein | |||
| 16810 | site-specific integrase | |||
| 16815 | S | S2.Vna82A3ORF11760P (100% identity) | S2.Vpa82E4ORF16820P | |
| 16820 | M | M.Vpa021D1ORF11720P (100% identity) | M2.Vpa82E4ORF16820P | |
| 16825 | S | S.Vpa021D1ORF11720P (100% identity) | S1.Vpa82E4ORF16820P | |
| 16830 | AAA family ATPase | |||
| 16835 | R | Vpa021D1ORF11720P (100% identity) | Vpa82E4ORF16820P | |
| 16840 | M48 family metallopeptidase | |||
| 16845 | pancortin-3 | |||
| 16850 | 370 aa hypothetical protein | |||
| 16855 | helix-turn-helix domain-containing protein | |||
| 16860 | 91 aa hypothetical protein | |||
| 16865 | M | M.Vmi223ORF2598P (21% identity) | M1.Vpa82E4ORF16820P | |
| 16870 | nucleotidyl transferase AbiEii/AbiGii toxin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1965 | elongation factor Ts | |||
| 1970 | M | M.VpaSM4ORFEP (94% identity) | M.Vpa82E4ORF1970P | |
| 1975 | DEAD/DEAH box helicase family protein | |||
| 8305 | phage tail tape measure protein | |||
| 8310 | M | M.Vpa021D1ORF2485P (100% identity) | M.Vpa82E4ORF8310P | |
| 8315 | 84 aa hypothetical protein | |||
| chromosome II | ||||
| 22850 | 90 aa hypothetical protein | |||
| 22855 | M | M.Vpa021D1ORF23220P (100% identity) | M.Vpa82E4ORF22855P | |
| 22860 | phage tail tape measure protein | |||
| plasmid pVp-20-082E4B | ||||
| 26165 | 496 aa hypothetical protein | |||
| 26170 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa82E4ORF26170P | |
| 26175 | IS5 family transposase | |||