|
Putative Xanthomonas campestris pv. incanae 18048 RM systems
Ref: Dubrow,Z.E. and Bogdanove,A.J. unpublished
REBASE ref # 33955
Complete sequence: 4,978,509 bp
GenBank #: CP066978
REBASE acronym: Xca18048
Org_num: 56064
All begin JH290_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
6075 | Mrr restriction system protein | |||
6080 | M | M.Xcacc2ORF16555P (100% identity) | M.Xca18048ORF6080P | |
6085 | virulence RhuM family protein | |||
??? | S | S.XcaCN16ORFCP (100% identity) | S.Xca18048ORF6080P | |
6095 | R | Xca12049ORF15645P (100% identity) | Xca18048ORF6080P | |
6100 | 98 aa hypothetical protein | |||
15395 | restriction endonuclease subunit S | |||
15400 | M | M.Xca5057ORF15900P (98% identity) | M.Xca18048ORF15400P | |
15405 | damage-inducible protein D | |||
15410 | virulence RhuM family protein | |||
15415 | S | S.Xca424ORF6005P (98% identity) | S.Xca18048ORF15400P | |
15420 | R | Xca1371ORF15375P (99% identity) | Xca18048ORF15400P | |
15425 | M48 family metallopeptidase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
16325 | DUF87 domain-containing protein | |||
16330 | M | M.Xar122ORF1755P (92% identity) | M.Xca18048ORF16330P | |
16335 | DNA repair protein RadC | |||
16370 | 74 aa hypothetical protein | |||
16375 | M | M.Xca5824DndEP (100% identity) | M.Xca18048DndEP | |
16380 | DNA sulfur modification protein DndD | |||
16375 | DndE family protein | |||
16380 | M | M.Xsp426DndDP (99% identity) | M.Xca18048DndDP | |
16385 | 71 aa hypothetical protein | |||
16385 | 71 aa hypothetical protein | |||
16390 | M | M.Xsp426DndCP (100% identity) | M.Xca18048DndCP | |
16395 | helix-turn-helix transcriptional regulator | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
6070 | type II toxin-antitoxin system RelE/ParE family | |||
6075 | R | Xcacc2MrrP (100% identity) | Xca18048MrrP | |
6080 | SAM-dependent DNA methyltransferase | |||
14500 | IS5 family transposase | |||
14505 | R | XcaCN13aMcrCP (99% identity) | Xca18048McrCP | |
14510 | R | Xcacc2McrBP (99% identity) | Xca18048McrBP | |
14515 | 71 aa hypothetical protein |