Escherichia coli CX21 |
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Putative Escherichia coli CX21 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
Complete sequence: 4,979,402 bp
GenBank #: CP081762
REBASE acronym: EcoCX21
Org_num: 53683
All begin J6O46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5545 | IS1 family transposase | |||
| 5550 | R | KpnY516ORF19290P (100% identity) | EcoCX21ORF5560P | |
| 5555 | S | S.EcoFec10II (76% identity) | S.EcoCX21ORF5560P | |
| 5560 | M | M.Kpn80147ORFIP (98% identity) | M.EcoCX21ORF5560P | |
| 5565 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2580 | DUF2556 family protein | |||
| 2585 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.EcoCX21ORF2585P |
| 2590 | DNA-binding transcriptional regulator Fis | |||
| 8545 | conserved phage C-terminal domain-containing | |||
| 8550 | M | M.EcoNIH4ORF26475P (99% identity) | M1.EcoCX21ORF8550P | |
| 8555 | M | M2.EcoCX20ORF8555P (100% identity) | M2.EcoCX21ORF8550P | |
| 8560 | phage antirepressor KilAC domain-containing | |||
| 8575 | TrmB family transcriptional regulator | |||
| 8580 | M | M.EcoCX20ORF8585P (100% identity) | M.EcoCX21ORF8580P | |
| 8585 | 100 aa hypothetical protein | |||
| 10100 | phosphohydrolase | |||
| 10105 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCX21DcmP |
| 10110 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.EcoCX21DcmP |
| 10115 | drug/metabolite exporter YedA | |||
| 14265 | DUF1317 domain-containing protein | |||
| ??? | M | M.EcoCX20ORF14275P (100% identity) | M.EcoCX21ORF14270P | |
| 14275 | DUF4060 family protein | |||
| 19285 | LexA family transcriptional regulator | |||
| 19290 | M | M.EcoNIH4ORF11555P (100% identity) | GATC | M.EcoCX21ORF19290P |
| 19295 | PerC family transcriptional regulator | |||
| 22485 | phage holin, lambda family | |||
| 22490 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoCX21ORF22490P | |
| 22495 | 67 aa hypothetical protein | |||
| 22520 | LexA family transcriptional regulator | |||
| 22525 | M | M.EcoW102ORF22410P (100% identity) | GATC | M.EcoCX21ORF22525P |
| 22530 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3555 | inovirus Gp2 family protein | |||
| 3560 | R | Kox87739ORFCP (99% identity) | EcoCX21ORF3565P | |
| 3565 | M | M.Sen5006ORF16245P (100% identity) | M.EcoCX21ORF3565P | |
| 3570 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 9985 | prepilin-type N-terminal cleavage/methylation | |||
| 9990 | R | EcoZ137ORF8170P (88% identity) | CCGAG | EcoCX21ORF10015BP |
| 9995 | IS66 family insertion sequence hypothetical | |||
| 10000 | IS66 family insertion sequence element accessory | |||
| 10005 | IS66 family transposase | |||
| 10010 | R | KquC3001ORF9710P (11% identity) | CCGAG | EcoCX21ORF10015AP |
| 10015 | M | M.EcoCX20ORF10020P (100% identity) | CCGAG | M.EcoCX21ORF10015P |
| 10020 | SpnT protein | |||