Escherichia coli CX20 |
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Putative Escherichia coli CX20 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
Complete sequence: 4,979,402 bp
GenBank #: CP081805
REBASE acronym: EcoCX20
Org_num: 53682
All begin J6O22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5550 | IS1 family transposase | |||
| 5555 | R | KpnY516ORF19290P (100% identity) | EcoCX20ORF5565P | |
| 5560 | S | S.EcoFec10II (76% identity) | S.EcoCX20ORF5565P | |
| 5565 | M | M.Kpn80147ORFIP (98% identity) | M.EcoCX20ORF5565P | |
| 5570 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2585 | DUF2556 family protein | |||
| 2590 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.EcoCX20ORF2590P |
| 2595 | DNA-binding transcriptional regulator Fis | |||
| 8550 | conserved phage C-terminal domain-containing | |||
| 8555 | M | M.EcoNIH4ORF26475P (99% identity) | M1.EcoCX20ORF8555P | |
| 8560 | M | M2.EcoCX21ORF8550P (100% identity) | M2.EcoCX20ORF8555P | |
| 8565 | phage antirepressor KilAC domain-containing | |||
| 8580 | TrmB family transcriptional regulator | |||
| 8585 | M | M.EcoCX21ORF8580P (100% identity) | M.EcoCX20ORF8585P | |
| 8590 | 100 aa hypothetical protein | |||
| 10105 | phosphohydrolase | |||
| 10110 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCX20DcmP |
| 10115 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.EcoCX20DcmP |
| 10120 | drug/metabolite exporter YedA | |||
| 14270 | DUF1317 domain-containing protein | |||
| ??? | M | M.EcoCX21ORF14270P (100% identity) | M.EcoCX20ORF14275P | |
| 14280 | DUF4060 family protein | |||
| 19295 | LexA family transcriptional regulator | |||
| 19300 | M | M.EcoNIH4ORF11555P (100% identity) | GATC | M.EcoCX20ORF19300P |
| 19305 | PerC family transcriptional regulator | |||
| 22495 | phage holin, lambda family | |||
| 22500 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoCX20ORF22500P | |
| 22505 | 67 aa hypothetical protein | |||
| 22530 | LexA family transcriptional regulator | |||
| 22535 | M | M.EcoW102ORF22410P (100% identity) | GATC | M.EcoCX20ORF22535P |
| 22540 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3560 | inovirus Gp2 family protein | |||
| 3565 | R | Kox87739ORFCP (99% identity) | EcoCX20ORF3570P | |
| 3570 | M | M.Sen5006ORF16245P (100% identity) | M.EcoCX20ORF3570P | |
| 3575 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 9990 | prepilin-type N-terminal cleavage/methylation | |||
| 9995 | R | EcoZ137ORF8170P (88% identity) | CCGAG | EcoCX20ORF10020BP |
| 10000 | IS66 family insertion sequence hypothetical | |||
| 10005 | IS66 family insertion sequence element accessory | |||
| 10010 | IS66 family transposase | |||
| 10015 | R | KquC3001ORF9710P (11% identity) | CCGAG | EcoCX20ORF10020AP |
| 10020 | M | M.EcoCX21ORF10015P (100% identity) | CCGAG | M.EcoCX20ORF10020P |
| 10025 | SpnT protein | |||