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Putative Escherichia coli CX19 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
Sequence length: | GenBank #: | |
Chromosome: | 4,948,784 bp | CP081755 |
plasmid unnamed: | 10,710 bp | CP081759 |
REBASE acronym: EcoCX19
Org_num: 53681
All begin J6O06_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5555 | IS1 family transposase | |||
5560 | R | KpnY516ORF19290P (100% identity) | EcoCX19ORF5570P | |
5565 | S | S.EcoFec10II (76% identity) | S.EcoCX19ORF5570P | |
5570 | M | M.Kpn80147ORFIP (98% identity) | M.EcoCX19ORF5570P | |
5575 | integrase core domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2585 | DUF2556 family protein | |||
2590 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.EcoCX19ORF2590P |
2595 | DNA-binding transcriptional regulator Fis | |||
8335 | conserved phage C-terminal domain-containing | |||
8340 | M | M.EcoNIH4ORF26475P (99% identity) | M1.EcoCX19ORF8340P | |
8345 | M | M2.EcoCX21ORF8550P (100% identity) | M2.EcoCX19ORF8340P | |
8350 | phage antirepressor KilAC domain-containing | |||
8365 | TrmB family transcriptional regulator | |||
8370 | M | M.EcoCX21ORF8580P (100% identity) | M.EcoCX19ORF8370P | |
8375 | 100 aa hypothetical protein | |||
9890 | phosphohydrolase | |||
9895 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCX19DcmP |
9900 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.EcoCX19DcmP |
9905 | drug/metabolite exporter YedA | |||
14060 | DUF1317 domain-containing protein | |||
??? | M | M.EcoCX21ORF14270P (100% identity) | M.EcoCX19ORF14065P | |
14070 | DUF4060 family protein | |||
19080 | LexA family transcriptional regulator | |||
19085 | M | M.EcoNIH4ORF11555P (100% identity) | GATC | M.EcoCX19ORF19085P |
19090 | PerC family transcriptional regulator | |||
22280 | phage holin, lambda family | |||
22285 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoCX19ORF25555P | |
22290 | 67 aa hypothetical protein | |||
22315 | LexA family transcriptional regulator | |||
22320 | M | M.EcoW102ORF22410P (100% identity) | GATC | M.EcoCX19ORF22320P |
22325 | PerC family transcriptional regulator | |||
plasmid unnamed | ||||
25550 | 67 aa hypothetical protein | |||
25555 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoCX19ORF25555P | |
25560 | phage holin, lambda family | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3560 | inovirus Gp2 family protein | |||
3565 | R | Kox87739ORFCP (99% identity) | EcoCX19ORF3570P | |
3570 | M | M.Sen5006ORF16245P (100% identity) | M.EcoCX19ORF3570P | |
3575 | Cd(II)/Pb(II)-responsive transcriptional | |||
9775 | prepilin-type N-terminal cleavage/methylation | |||
9780 | R | EcoZ137ORF8170P (88% identity) | CCGAG | EcoCX19ORF9805BP |
9785 | IS66 family insertion sequence hypothetical | |||
9790 | IS66 family insertion sequence element accessory | |||
9795 | IS66 family transposase | |||
9800 | R | KquC3001ORF9710P (11% identity) | CCGAG | EcoCX19ORF9805AP |
9805 | M | M.EcoCX21ORF10015P (100% identity) | CCGAG | M.EcoCX19ORF9805P |
9810 | SpnT protein |