Escherichia coli 0H23 |
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Putative Escherichia coli 0H23 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
| Sequence length: | GenBank #: | |
| Chromosome: | 4,992,324 bp | CP081684 |
| plasmid unnamed1: | 303,841 bp | CP081685 |
REBASE acronym: Eco0H23
Org_num: 53253
All begin J6O16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10510 | 388 aa hypothetical protein | |||
| 10515 | M | M.Eho50EhORF13780P (100% identity) | M.Eco0H23ORF10515P | |
| 10520 | S | S.EcoPO3ORF10055P (100% identity) | S.Eco0H23ORF10515P | |
| 10525 | YecA family protein | |||
| 10530 | cold shock domain-containing protein | |||
| 10535 | R | EcoPO3ORF10055P (100% identity) | Eco0H23ORF10515P | |
| 10540 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1970 | cell division protein DamX | |||
| 1975 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0H23DamP |
| 1980 | ribulose-phosphate 3-epimerase | |||
| 2605 | DUF2556 family protein | |||
| 2610 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.Eco0H23ORF2610P |
| 2615 | DNA-binding transcriptional regulator Fis | |||
| 5875 | PerC family transcriptional regulator | |||
| 5880 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0H23ORF5880P |
| 5885 | LexA family transcriptional regulator | |||
| 5920 | 67 aa hypothetical protein | |||
| 5925 | M | M.EcoWATORF2902P (100% identity) | M.Eco0H23ORF5925P | |
| 5930 | phage lysis protein EssD | |||
| 6060 | 257 aa hypothetical protein | |||
| 6065 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco0H23ORF6065P | |
| 6070 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco0H23ORF6065P |
| 6075 | toxin | |||
| 10170 | phosphohydrolase | |||
| 10175 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0H23DcmP |
| 10180 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Eco0H23DcmP |
| 10185 | drug/metabolite exporter YedA | |||
| 19245 | LexA family transcriptional regulator | |||
| 19250 | M | M.EcoNIH4ORF11555P (100% identity) | GATC | M.Eco0H23ORF19250P |
| 19255 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24475 | DNA-binding protein | |||
| 24480 | M | M.Ype21801ORF197P (100% identity) | M.Eco0H23ORF24480P | |
| 24485 | 273 aa hypothetical protein | |||
| 25300 | thermonuclease family protein | |||
| 25305 | M | M.Eco0H26ORF24430P (100% identity) | M.Eco0H23ORF25305P | |
| 25310 | 55 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6175 | ATP-binding domain-containing protein | |||
| 6180 | M | M.Eco11131ORF1445AP (85% identity) | M.Eco0H23ORF6180AP | |
| 6185 | IS30-like element IS30 family transposase | |||
| 6190 | M | M.Eco0H26ORF6180BP (100% identity) | M.Eco0H23ORF6180BP | |
| 6195 | R | Eco11131ORF1445P (100% identity) | Eco0H23ORF6180P | |
| 6200 | AAA family ATPase | |||
| 10075 | prepilin-type N-terminal cleavage/methylation | |||
| 10080 | R | Eco0H26ORF10080P (100% identity) | CCGAG | Eco0H23ORF10085P |
| 10085 | M | M.Eco0H26ORF10080P (100% identity) | CCGAG | M.Eco0H23ORF10085P |
| 10090 | SpnT protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23195 | 59 aa hypothetical protein | |||
| 23200 | M | M.Eco0H26ORF23190P (100% identity) | M.Eco0H23ORF23200P | |
| 23205 | 70 aa hypothetical protein | |||