Serratia species JSRIV004 |
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Putative Serratia species JSRIV004 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
Complete sequence: 6,068,281 bp
GenBank #: CP074140
REBASE acronym: SspV004
Org_num: 55428
All begin KGP21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 565 | tyrosine-type recombinase/integrase | |||
| 570 | M | M.Yfr418I (95% identity) | M.SspV004ORF570P | |
| 575 | S | S.MmoD581ORF2050P (57% identity) | S.SspV004ORF570P | |
| 580 | anticodon nuclease | |||
| 585 | R | SspV002ORF570P (100% identity) | SspV004ORF570P | |
| 590 | 104 aa hypothetical protein | |||
| 3850 | 413 aa hypothetical protein | |||
| 3855 | M | M.SspV006ORF3185P (100% identity) | M.SspV004ORF3855P | |
| 3860 | S | S.SspV006ORF3185P (100% identity) | S.SspV004ORF3855P | |
| 3865 | R | SspV006ORF3185P (99% identity) | SspV004ORF3855P | |
| 3870 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 380 | BREX system P-loop protein BrxC | |||
| 385 | RM | SspV002ORF390P (100% identity) | SspV004ORF385P | |
| 390 | DUF262 domain-containing protein | |||
| 3875 | McrC family protein | |||
| 3880 | R | SspV006ORF3210P (100% identity) | SspV004ORF3880P | |
| 3885 | LuxR family transcriptional regulator | |||
| 4385 | 367 aa hypothetical protein | |||
| 4390 | M | M.SfoMS5ORF10740P (90% identity) | M.SspV004ORF4390P | |
| 4395 | site-specific DNA-methyltransferase | |||
| 4390 | DNA cytosine methyltransferase | |||
| 4395 | M | M.SspV002ORF7490P (94% identity) | M.SspV004ORF4395P | |
| 4400 | RusA family crossover junction | |||
| 12880 | 74 aa hypothetical protein | |||
| 12885 | M | M.SfoBWK15ORF8945P (97% identity) | M.SspV004ORF12885P | |
| 12890 | DUF968 domain-containing protein | |||
| 12905 | 427 aa hypothetical protein | |||
| 12910 | M | M.SfoAP2CORF3156P (94% identity) | M.SspV004ORF12910P | |
| 12915 | bssS family protein | |||
| 26705 | ribulose-phosphate 3-epimerase | |||
| 26710 | M | M.SspV006DamP (100% identity) | GATC | M.SspV004DamP |
| 26715 | SPOR domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3865 | type I restriction endonuclease subunit R | |||
| 3870 | R | SspV006McrBP (99% identity) | SspV004McrBP | |
| 3875 | R | SspV006McrCP (100% identity) | SspV004McrCP | |
| 3880 | HNH endonuclease | |||