Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N17S1465 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N17S1465 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,998,918 bp | CP082624 |
| plasmid pN17S1466-1: | 249,408 bp | CP082625 |
| plasmid pN17S1466-2: | 92,018 bp | CP082626 |
REBASE acronym: Sen1465
Org_num: 55164
All begin D7H05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20225 | restriction endonuclease | |||
| 20230 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1465ORF20235P |
| 20235 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1465ORF20235P |
| 20240 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1465ORF20235P |
| 20245 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen1465DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 3230 | DUF2732 domain-containing protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen1465ORF3235P |
| 3240 | replication endonuclease | |||
| 5615 | IS6-like element IS26 family transposase | |||
| 5620 | M | M.StyCORF187P (49% identity) | M.Sen1465ORF5620P | |
| 5625 | thermonuclease family protein | |||
| 6250 | ead/Ea22-like family protein | |||
| 6255 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen1465ORF6255P |
| 6260 | 92 aa hypothetical protein | |||
| 9570 | PerC family transcriptional regulator | |||
| 9575 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen1465ORF9575P |
| 9580 | RusA family crossover junction | |||
| 9820 | phosphohydrolase | |||
| 9825 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1465DcmP |
| 9830 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen1465DcmP |
| 9835 | drug/metabolite exporter YedA | |||
| 20385 | BREX system P-loop protein BrxC | |||
| 20390 | RM | StyUK1IV (100% identity) | GATCAG | Sen1465ORF20390P |
| 20395 | AAA family ATPase | |||
| 22305 | LexA family transcriptional regulator | |||
| 22310 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen1465ORF22310P |
| 22315 | PerC family transcriptional regulator | |||
| plasmid pN17S1466-1 | ||||
| 24445 | 55 aa hypothetical protein | |||
| 24450 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Sen1465Dcm2P |
| 24455 | thermonuclease family protein | |||
| 24895 | DNA-binding protein | |||
| 24900 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sen1465ORF24900P |
| 24905 | 284 aa hypothetical protein | |||
| plasmid pN17S1466-2 | ||||
| 26145 | recombination-associated protein RdgC | |||
| 26150 | M | M.Sen9860ORF25540P (100% identity) | M.Sen1465ORF26150P | |
| 26165 | SPFH/Band 7/PHB domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17930 | small effector SsaA | |||
| 17935 | R | StyUK1IP (99% identity) | CAGAG | Sen1465ORF17940P |
| 17940 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1465ORF17940P |
| 17945 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20220 | BrnT family toxin | |||
| 20225 | R | StyUK1MrrP (100% identity) | Sen1465MrrP | |
| 20230 | type I restriction-modification system | |||