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Putative Salmonella enterica subsp. enterica serovar Derby CVM N17S1441 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Sequence length: | GenBank #: | |
Chromosome: | 4,872,905 bp | CP082627 |
plasmid pN17S1441: | 85,883 bp | CP082628 |
REBASE acronym: SenS1441
Org_num: 55196
All begin D7H03_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19495 | 322 aa hypothetical protein | |||
19500 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | SenS1441ORF19505P |
19505 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.SenS1441ORF19505P |
19510 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.SenS1441ORF19505P |
19515 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1720 | cell division protein DamX | |||
1725 | M | M.StyTDamP (100% identity) | GATC | M.SenS1441DamP |
1730 | ribulose-phosphate 3-epimerase | |||
5390 | PerC family transcriptional regulator | |||
??? | M | M.SenS707ORF21285P (99% identity) | GATC | M.SenS1441ORF5395P |
5400 | RusA family crossover junction | |||
6310 | recombinase family protein | |||
6315 | M | M.Sen8646ORF16620P (100% identity) | CTGCAG | M.SenS1441ORF6315P |
6320 | R | Sen8646ORF16620P (100% identity) | CTGCAG | SenS1441ORF6315P |
6325 | 134 aa hypothetical protein | |||
13610 | drug/metabolite exporter YedA | |||
13615 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS1441DcmP |
13620 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.SenS1441DcmP |
13625 | phosphohydrolase | |||
17360 | phage holin, lambda family | |||
17365 | M | M.SensSZL38ORF10585P (100% identity) | M.SenS1441ORF17365P | |
17370 | 92 aa hypothetical protein | |||
17395 | LexA family transcriptional regulator | |||
17400 | M | M.SflN101ORF11410P (100% identity) | GATC | M.SenS1441ORF21265P |
17405 | PerC family transcriptional regulator | |||
19640 | YebC/PmpR family DNA-binding transcriptional | |||
19645 | R | SensTJX21ORF12025P (100% identity) | SenS1441ORF19645P | |
19650 | fosfomycin resistance glutathione transferase | |||
19670 | RM | SensTJX21ORF12050P (100% identity) | SenS1441ORF19670P | |
19675 | DEAD/DEAH box helicase | |||
23375 | recombinase family protein | |||
23380 | M | M.SspW3ORF4074P (100% identity) | CTGCAG | M.SenS1441ORF23380P |
23385 | R | SkhJW44ORF21540P (100% identity) | CTGCAG | SenS1441ORF23380P |
23390 | 214 aa hypothetical protein | |||
plasmid pN17S1441 | ||||
23820 | 73 aa hypothetical protein | |||
23825 | M | M.SspPIBORF23080P (100% identity) | M.SenS1441ORF23825P | |
23830 | 103 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17005 | small effector SsaA | |||
17010 | R | StyUK1IP (99% identity) | CAGAG | SenS1441ORF17015P |
17015 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.SenS1441ORF17015P |
17020 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19675 | DEAD/DEAH box helicase | |||
19680 | R | SensTJX21ORF12060P (100% identity) | SenS1441ORF19680P | |
19685 | 104 aa hypothetical protein |