Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N16S144 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N16S144 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,998,648 bp | CP082650 |
| plasmid pN16S144: | 70,983 bp | CP082651 |
REBASE acronym: Sen23701
Org_num: 8431
All begin CWY03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20220 | restriction endonuclease | |||
| 20225 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen23701ORF20230P |
| 20230 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen23701ORF20230P |
| 20235 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen23701ORF20230P |
| 20240 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen23701DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen23701ORF3037P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 domain-containing protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen23701ORF3235P |
| 3240 | replication endonuclease | |||
| 5610 | IS6-like element IS26 family transposase | |||
| 5615 | M | M.StyCORF187P (49% identity) | M.Sen23701ORF5615P | |
| 5620 | thermonuclease family protein | |||
| 6245 | ead/Ea22-like family protein | |||
| 6250 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen23701ORF6250P |
| 6255 | 92 aa hypothetical protein | |||
| 9565 | PerC family transcriptional regulator | |||
| 9570 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen23701ORF9570P |
| 9575 | RusA family crossover junction | |||
| 9815 | phosphohydrolase | |||
| 9820 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen23701DcmP |
| 9825 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen23701DcmP |
| 9830 | drug/metabolite exporter YedA | |||
| 20380 | BREX system P-loop protein BrxC | |||
| 20385 | RM | StyUK1IV (100% identity) | GATCAG | Sen23701ORF345P |
| 20390 | AAA family ATPase | |||
| 22300 | LexA family transcriptional regulator | |||
| 22305 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen23701ORF22305P |
| 22310 | PerC family transcriptional regulator | |||
| plasmid pN16S144 | ||||
| 24485 | class 1 integron integrase IntI1 | |||
| 24490 | R | Lad1ORF23300P (100% identity) | CCWGG | Sen23701ORF24490P |
| 24495 | recombinase family protein | |||
| 24795 | IS1 family transposase | |||
| 24420 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Sen23701ORF24420P |
| 24425 | EAL domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17925 | small effector SsaA | |||
| 17930 | R | StyUK1IP (99% identity) | CAGAG | Sen23701ORF17935P |
| 17935 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen23701ORF17935P |
| 17940 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20215 | BrnT family toxin | |||
| 20220 | R | StyUK1MrrP (100% identity) | Sen23701MrrP | |
| 20225 | type I restriction-modification system | |||